Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3998 ATGGCTGKTTGTGATTTCCAGTGCGTTGCATTGCTGCGTATAATAATAATAATTCCTGTAATTGCAAATGCTCAGACTCTATTATCTTTTAACTGCACCAACTTCACCCAAYGTCATTGTGCTGATGAACTAACCCTGCAAGGTGATGCTAGTCACGCACAATCTTCTAACGTTATCGAACTCGCAGGAAGCAAAAAGAATGCTTCAGGATTRGGAAGAGTGYTAACAAAGGWAACACATCTTAAGGTAAATAATTCAAGATACGACTTCACCACAAACTTCTCCTTTCTSGTTTTCACAGAGGATCCCACCTATCCTGGAGATGGTTTGGCATTCTACATAGCAAGCCCGAAACTCCCGATCCAAGACCATATAGACGGCGGAGGCCTCGGCCTTGCCAAGMWTTACCACCARCTCCCAAGTGGTTACTCTTTTGTGGCTCTGGAGTTTGACACATTCTCAAATGWATGGGATCCAAGTGGTCCATRCCCGCATGTAGGACTAGATCTCAATTCTGTTGTTTCCAGCCTCTCTGAGACATGGTTGGTAGATTTTTCAGAGAGAAATAAAGTGTTCAATTGTAGTATTGAWTACAACTCTGGAACCAAGCGTCTAGATGCTTTCTTCACTGCAAGCTCCRTCAATGGACCTGTAAAGAAGCAATTTTCGTTTCCTTTGGATCTCGATGAGTTCATACAAGATCCTGTTACTATTGGCATATCAGCTGCAGTTGCAGAAAAAAATTATACMGTGGGATATAGCTTGTTGTCATGGTCATTCAGTTCAACCTTACATGTGCCGAGTAATGCGGCCGGTTCCTTTCCTTACAAGGCACATTTGGAGAAAGCACTAGAAATAGGGATTGGTTTCTTTCTATGTTTATTTGTTTTGATATTAGTCCTACTCCTGATTTTGATACAGAGGGGAGGGAAAAGAAATCCTGAATCGGCGTTTGATCTGATGGATCATGAATTCCAAACGGGCACTGGACCACAGAGGATCAGCTATGACAGATTGGTGTGCGCAACGGATAACTTCCAAGAGGCGAAGAAACTTGGAAGAGGCGGTTTTGGTGCTGTGTATAAAGGATATTTCAAAGATACAGACTCTTATGCTGCTGTAAAGAAGATATCAGCAGATTCAAAGCAGGGATTAAAGGAATATGCAGCTGAAGTGAAGATCATTAGCCAATTGAGACACAGGAATTTGGTGAGACTTACTGGTTGGTGTCACAAGAAGAATGACTTCGTCCTGATATATGAGTACATGCCGAATGGAAGCTTGGATTCTTTTCTTTTCCACGGAGTAGGCTTCTTGTCTTGGCAAGTAAGGTACAACATAGCTTTGGGYTTGGCATCGGCATTGCTATATCTGCAAGAAGGGTGGGAAAAGTGTGTGCTTCACAGGGACATTAAATCAAGCAACATAATGTTGGACTCAGATTTCAATGCTAAACTTGGGGATTTTGGATTGGCCAGGCTTGTGGATCATGAGAAAGGTTCAAGGACCACAGTGACTGCTGGCACACTTGGTTACATGGCACCAGAATACATGAAAACAGGAAAAGTTCGAAAGGAATCTGATATATACAGTTTTGGGGTGGTTTTGTTGGAGATAGCAAGTGGCAAAAAGGTTATGCACCACATAGAATTGGAGGGTCGTGTGACTCAAGTTTCATTGGTAGAGTGGGTTTGGGAGCTGTATGGGTTGAGAAACATCACAGCAGCAGCAGATCCAAATCTATGTGTTGCATTTGATGATCAACAAATGGAATGTATGCTTGTTGTTGGTCTTTGGTGTGCTCATCCAGATTGCAGATGCAGGCCCTCTGTAAGGCAAGTGATGAAAGTGCTTAACTTTGATGCTCCTTTACCCATTCTTCCAGAAAGAATGCCTCTTCTACCCTATCTCCCCTCAACCACAAATGAAGTCTTTTTAACTGCTGTTTCTTCATTCTCTGGTACCTAA 1968 0.4228 MAXCDFQCVALLRIIIIIPVIANAQTLLSFNCTNFTQXHCADELTLQGDASHAQSSNVIELAGSKKNASGLGRVLTKXTHLKVNNSRYDFTTNFSFLVFTEDPTYPGDGLAFYIASPKLPIQDHIDGGGLGLAKXYHQLPSGYSFVALEFDTFSNXWDPSGPXPHVGLDLNSVVSSLSETWLVDFSERNKVFNCSIXYNSGTKRLDAFFTASSXNGPVKKQFSFPLDLDEFIQDPVTIGISAAVAEKNYTVGYSLLSWSFSSTLHVPSNAAGSFPYKAHLEKALEIGIGFFLCLFVLILVLLLILIQRGGKRNPESAFDLMDHEFQTGTGPQRISYDRLVCATDNFQEAKKLGRGGFGAVYKGYFKDTDSYAAVKKISADSKQGLKEYAAEVKIISQLRHRNLVRLTGWCHKKNDFVLIYEYMPNGSLDSFLFHGVGFLSWQVRYNIALGLASALLYLQEGWEKCVLHRDIKSSNIMLDSDFNAKLGDFGLARLVDHEKGSRTTVTAGTLGYMAPEYMKTGKVRKESDIYSFGVVLLEIASGKKVMHHIELEGRVTQVSLVEWVWELYGLRNITAAADPNLCVAFDDQQMECMLVVGLWCAHPDCRCRPSVRQVMKVLNFDAPLPILPERMPLLPYLPSTTNEVFLTAVSSFSGT* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3998 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Amo13g3998 655 ProSiteProfiles Protein kinase domain profile. 346 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3998 655 PANTHER LECTIN RECEPTOR KINASE 17 653 - -
Amo13g3998 655 Gene3D - 26 276 - -
Amo13g3998 655 SUPERFAMILY Protein kinase-like (PK-like) 330 637 IPR011009 -
Amo13g3998 655 Gene3D Transferase(Phosphotransferase) domain 1 423 633 - -
Amo13g3998 655 CDD lectin_legume_LecRK_Arcelin_ConA 28 264 IPR001220 GO:0030246
Amo13g3998 655 SMART serkin_6 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3998 655 PANTHER - 17 653 - -
Amo13g3998 655 ProSitePatterns Protein kinases ATP-binding region signature. 352 376 IPR017441 GO:0005524
Amo13g3998 655 CDD STKc_IRAK 352 619 - -
Amo13g3998 655 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Amo13g3998 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 270 IPR013320 -
Amo13g3998 655 Pfam Protein kinase domain 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3998 655 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3998 Amo-Chr13 132690142 132692109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3998 7 636 Receptor kinase-like Gene Family AT5G10530 42.613 6.12e-165 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g3998 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3998 - - cam:101492002 605.905