Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3972 ATGGGCTCATCAAATGCCTTTGGCTGGGCTGCAACAGATACCTCTGGTCAGCTCTCTCCCTTCCATTTCTCAAGAAGGGAAAACGAAGCTGATGACGTCACTCTCAAAATCCTCTTCTGCGGGGTTTGCCATTCCGATCTGCACACAATCAAGAACGACTGGGGTTTCACTACTTACCCCGTTGTCCCTGGGCATGAAATTGCTGGTATTGTGACAAAAGTTGGAAGTAATGTGACAAAATTTAAGGAGGGGGATAGAGTTGGAGTTGGTGTAATAGTGGACTCATGTAAGGAATGTGAGTGTTGCCAGCAGGATCTGGAGAATTACTGTCCTAGAACTGTGTATACCTATAACTCTCCTTATAAAGGGACACGAACGCAGGGTGGCTACTCCGATTTCGTGGTTGTTCACCAGCGCTTTGTGCTTCGATTTCCCGACAACTTACCCCTTGATGCCGGTGCCCCTCTTCTGTGTGCTGGGATTACTGTGTATAGCCCAATGAAGTATTATGGGATGACAGAGCCCGGCAAGCATTTGGGAGTGGCCGGCCTCGGCGGCTTAGGCCACGTTGCCATCAAATTTGGCAAAGCATTTGGTCTCAAAGTTACTGTCATTAGTGGCTCTCCCAACAAGGAAGCTGAGGCCATTCACACTCTAGGGGCTGATTCTTTCCTTCTTTCCTCTGATCCTGAAAAAATGAAGGCTGCCATGGGAACAATGGATTATATCATCAGCACGATTTCCGCCGTCCATCCGCTGGCTCCCCTGCTTGGTCTGCTGAAGCTGAACGGAAAGCTGGTCAATGTAGGGCTGCCTAGCAAGCCTCTTCAGCTGCCTATCTTCCCCTTGGTTGGAGGAAGGAAGCTTATAGGGGGAAGCAACTTTGGAGGGCTGAAGGAGACTCAGGAGATGCTTGATTTCTGTGCAAAGCATAACATAACTGCAAATATTGAGCTGATTAAGATGGATGAGATCAACACTGCTATCGAAAGGCTCAGCAAATCCGATGTTAAATATCGCTTTGTTATTGATGTTGCAAACTCCTTATCTTCCAGTAACATGTAG 1065 0.4779 MGSSNAFGWAATDTSGQLSPFHFSRRENEADDVTLKILFCGVCHSDLHTIKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCKECECCQQDLENYCPRTVYTYNSPYKGTRTQGGYSDFVVVHQRFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISGSPNKEAEAIHTLGADSFLLSSDPEKMKAAMGTMDYIISTISAVHPLAPLLGLLKLNGKLVNVGLPSKPLQLPIFPLVGGRKLIGGSNFGGLKETQEMLDFCAKHNITANIELIKMDEINTAIERLSKSDVKYRFVIDVANSLSSSNM* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3972 354 SUPERFAMILY GroES-like 13 177 IPR011032 -
Amo13g3972 354 SMART PKS_ER_names_mod 16 343 IPR020843 GO:0016491
Amo13g3972 354 Pfam Alcohol dehydrogenase GroES-like domain 31 142 IPR013154 -
Amo13g3972 354 Gene3D - 9 345 - -
Amo13g3972 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 313 IPR036291 -
Amo13g3972 354 Pfam Zinc-binding dehydrogenase 186 309 IPR013149 -
Amo13g3972 354 CDD CAD1 7 344 - -
Amo13g3972 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Amo13g3972 354 Gene3D - 159 315 - -
Amo13g3972 354 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 351 - -
Amo13g3972 354 PANTHER ALDEHYDE REDUCTASE 4 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3972 Amo-Chr13 132214543 132217872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3972 4 349 Monolignol Biosynthesis Gene Families AT2G21890 72.989 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3972 K00083 - gmx:100819684 587.03