Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3968 ATGGAGGGGACCGAGGAGGACAACCTCGTGGCATCAACTATGTATTGCTATGGTAATGGATTGTTTCAGGCAGACGATCAAAGAGATGTCATCATTCTCGATGGAATAGGTTTGTTTGGTGCAATTGATTTTGATGCGTTGCGAGCTGAGGAGATTATGATGATAGAGTTTGTACATTTGAAAACTACTTATGACTTCTATAACGAGTTCGGTCGAATTAAGGGGTTTTCCATAAGGCGGTCGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAAGGAGACATTATATGGCAAATTTTTGTGTGCTCGCGACAAGGTGAACGAGATGCAAAGCATGTTCATAGAAATGGTAGGAAGATGGATCCTAGACCAGTAACGCGATGCGGGTGTAATGCGCGGATAAAAGTTTATGTTGACTCGAGGAACGGACGATGGTACGTTGAGTTCTTCTCCGATGAACATAACCAAGACATGTTGGAGGCAAGGTTTAGGGGAATGATGCGTGGTGGATTCGAGATGGTTGGGTTGGAGGTGAAAGACATCTATAATGCAATTGAGAAGCAAAGAAGAGCTGGAGCCAGCGACACGGATAATGCACTAAAGTATTTACAAATGTTAAAGAGTCGTGACCCCTCTAGCAATGTCAGAGTAGTTTCTTCGAAGAAGACAAGCATGTTTACATTGTTTGAGGTGGCCATGTATTGCCAAGTCTTATACTGGGTCGTTGGACAAAGAAGGCAAAATAAACCACCGATAAATAACCATGTTTTTAGTGGAGAGATTCCTGATGCAGCCTATATGAGTATGCATGTGGCAATGCTCAATGACTATAGTGAACTAGTGAAGCTTTCTTGTAGTTACTTTGAGGATTACTTCAAGGTGAAAACCAAAATAGCTAATGAACAAGACGCGTTAAGAGAAAAGATCCGGAAAAGGTTGGCCACCACTGCTGAGGGCGGGGGCGATGATGTGTCCATACACGATATGACAACTCGAGGGAGGTACCGGCGTGTCCAATACTGCAGAAAGTGTGGAAAGGCTGGCCATAACGCTCGTAGATGCATCGACGGGAATGGTGACGATACCACACATGAATTAGATGCTTTGGGATCATCGCACAACATGGACGAATCACAAGAAGCTGAGGCTTCGCAACCAATGGAATACGATAGTCTGAGATTCTAA 1185 0.4439 MEGTEEDNLVASTMYCYGNGLFQADDQRDVIILDGIGLFGAIDFDALRAEEIMMIEFVHLKTTYDFYNEFGRIKGFSIRRSKVGRCKKAGSEGDIIWQIFVCSRQGERDAKHVHRNGRKMDPRPVTRCGCNARIKVYVDSRNGRWYVEFFSDEHNQDMLEARFRGMMRGGFEMVGLEVKDIYNAIEKQRRAGASDTDNALKYLQMLKSRDPSSNVRVVSSKKTSMFTLFEVAMYCQVLYWVVGQRRQNKPPINNHVFSGEIPDAAYMSMHVAMLNDYSELVKLSCSYFEDYFKVKTKIANEQDALREKIRKRLATTAEGGGDDVSIHDMTTRGRYRRVQYCRKCGKAGHNARRCIDGNGDDTTHELDALGSSHNMDESQEAEASQPMEYDSLRF* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3968 394 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 48 207 - -
Amo13g3968 394 MobiDBLite consensus disorder prediction 365 394 - -
Amo13g3968 394 Pfam FAR1 DNA-binding domain 65 158 IPR004330 -
Amo13g3968 394 ProSiteProfiles Zinc finger CCHC-type profile. 341 354 IPR001878 GO:0003676|GO:0008270
Amo13g3968 394 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 48 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3968 Amo-Chr13 132104993 132107285 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g3968 FAR1 2.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3968 - - ahf:112803492 342.813