Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3946 ATGGTGTGCCAAGCAGCAAGCCAAACAAGATTTCGGGCATTGAAACATGAGAATGGCCTTGAAGGTGAATCGACAATTGTTGTTAGAGTTATAGCTTGCTTCCAACCGCTGCACTTTTGTCAGGCTGAGTACTTCCGTCATTTGCTTAAGCCCGTCACAGAAGCAGCAAGTCACTGGAGATCTAATCCGATATCTGGTGTACATAGCATTTACGGATGTTTGCCTCGCCCACAGCATGTGGCTTGGCGATATCCATATTTGAATTGCTTTGGCATGCTGGAAGACCCCAGCTTACTTGGTATTTCAGCATGTTTAAATTCTACCACTCGCATCTTTCCTGCTGTCAATGCATTTCAAGGACCTGCAGCTCCTGCTATCCCGGGTCCAAAGACTGAGCCAACAGATGAGTTGAAACATTTCCTTCGGCATCCCATTGCAAAAACAGGTTTCAAAGAAGTGCATACTGGAGGGTCTTTGCAAAATGCAAATCCTGAATCTTTGCAGAGAAAATTCCTGATTTTTGACCGCTCTGGTAATAAGACACGAATGTTTTACGGTCCTGGCCTCCCTCATGTCCAGGGTCCAATTATTTCTGCTAGAGAATTTCCTCTAGCTTGTGATATAAATGAGAAGGGATGGACAAGTAGTATGCGTCAAAATGGTCTAGCCGATTGCAGTTTACCAAAAAAGTCTGATAATGATCATGTAGGTCATGAAGAAAGTGAAATGCATGAAGACACGGAGGAAATCAATGCATTGCTTTATTCTGATGATGATGACAGTGATTATAATGATTGTGATGATGACGAGGTAACAAGTACAGACCATTCCCCTTTGGTTACTAAAAGGACCTATGGTATGCAAGAACAATTTCAACACACAACTGAGGGGGTTGCTACCTATGACTGGCCTAACAAAAGGCCGAAGTTAGTTGATGGTGGCTGCAATAGATCACCACAACCTGTGGACAGTTCCAGTTCGTTAAGACCAAATGAAAACCACGAGTGCATTAGTGATGCTGAATCACAGAATTCTTTTGGCGCTGAGAAAGTAGGTAAATCAATGGCAGGTGATTTTCAGTTGAAAAAGGACCAGATTCGGGAATTATTGAGAGTTCTTGAGAACTTGATTCCTGGTGCAAAAGGAAAGCAGCCACTTTTTGTCATTGATCAAACTATTGAGTACTTGAAAGCTTTGGCGTCCAAAACTCAACACTTGGAGTAA 1224 0.4273 MVCQAASQTRFRALKHENGLEGESTIVVRVIACFQPLHFCQAEYFRHLLKPVTEAASHWRSNPISGVHSIYGCLPRPQHVAWRYPYLNCFGMLEDPSLLGISACLNSTTRIFPAVNAFQGPAAPAIPGPKTEPTDELKHFLRHPIAKTGFKEVHTGGSLQNANPESLQRKFLIFDRSGNKTRMFYGPGLPHVQGPIISAREFPLACDINEKGWTSSMRQNGLADCSLPKKSDNDHVGHEESEMHEDTEEINALLYSDDDDSDYNDCDDDEVTSTDHSPLVTKRTYGMQEQFQHTTEGVATYDWPNKRPKLVDGGCNRSPQPVDSSSSLRPNENHECISDAESQNSFGAEKVGKSMAGDFQLKKDQIRELLRVLENLIPGAKGKQPLFVIDQTIEYLKALASKTQHLE* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3946 407 MobiDBLite consensus disorder prediction 311 341 - -
Amo13g3946 407 MobiDBLite consensus disorder prediction 226 247 - -
Amo13g3946 407 PANTHER TRANSCRIPTION FACTOR SAC51 74 406 - -
Amo13g3946 407 MobiDBLite consensus disorder prediction 318 341 - -
Amo13g3946 407 PANTHER TRANSCRIPTION FACTOR BHLH145 74 406 IPR037546 -
Amo13g3946 407 MobiDBLite consensus disorder prediction 228 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3946 Amo-Chr13 131667053 131668607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3946 156 399 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 37.452 7.29e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3946 - - gmx:100817942 355.91