Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3936 ATGGAGAAAGGTAAATACTTAGCATTGGTTGGAACCGGTGCTCTTTTTGGCTCTGTATCTACCATCTTCTTTCTTAGGCTCCTTCAAAACCATAAAAAAGTGGTGCGGCAGTATAATAAGAATGCTACCGAGTTAAATGGTCTTGAGACTTGCACTATTGCTGGAAAGAAGAATGATAAGGCAGTTAATGAAGATCTTCTGAAGGATGAGATTGTTTCTGAACATCTAACTAGGAACATTCAGTTTTTTGGCTTTGAGTCTCAGCAGAAAGTGAGTGCATCATATGTTGTGGTCATTGGTCTTGGAGGGGTTGGCAGTCATGCTGCATCTATGCTCTTGAGATCAGGGGTCGGCAAGCTTCTTCTTGTGGACTTTGATCAGGTTTCTCTTTCATCATTAAATCGACACGCTGTTGCAACAAGAGCAGATGTTGGYATCCCAAAAGCGCAGTGCCTTAAGGAGCATTTCTCATCTATCTTTCCTGAGTGCCAAGTAGATGCAAAAGTACTGCTATATGATTCATCTACCGAAGAAGAAATTTTGTCAGGCCACCCTGACTTTGTCTTGGATTGTATTGATAACATTGATACTAAGGTGGCACTTCTTGCTGCTTGTGTACGGAGGGGCCTGAAGGTGTTATCTGCCACTGGGGCTGGTGCTAGAGCCGATCCAACTAGAATACGCATTGCTGATTTAAGAGAGTCAACTAATGATCCATTGTCTCGATCTGTGAGACACCGTTTGAGGAAAGATCATGGCATTGAAGGTGGCATCCCTGTTGTATTTTCTTTAGAAAAACCCAAAGCTAAGTTGCTTCCATTTAAGGGTCCAAATGGTGAAGAGGAAAATCCTTCAGACTACCAGATAGTACCAGGCTTCAGGGTCCGTATCATACCGGTGTTAGGCACAATCCCTGCAATATTTGGACAAGTTATGGCATCCTATGTTGTGACGGAATTAGCAGGATTTCAAGTTCAAACAGAACCGATAGTCAATTTTGATACCGATCATTACCATACTCTCCATCAACGCCTTATTGAGCATGAGGAGTTAGTATATGGAACATCACAGCAAGTGCAGGTAGATATTGAAGAAGTGATGTATATTGTAAAAGAATTATGGCATGGAAGAAGTGCTAGAGACCAGCTTGTGAAAGAAGTTGGACGAGGAATGTGGCGATCAGTTAATGAATTAATGCTTGTAAGGTGGGATTGCGAAAAGCCGGCTTCTATATCAAATTTAATTCTTTTGAAATTCAAAGAGGTTGATGAGCATGAATCTAGAACATTGGATGATATAAAGGAAAAGGAACCTGAATTCTACAACAGTGTAAATGCAGTGTTAAAACGAGCTGAAATTGACTTTGGCTACGCACATTAA 1380 0.4116 MEKGKYLALVGTGALFGSVSTIFFLRLLQNHKKVVRQYNKNATELNGLETCTIAGKKNDKAVNEDLLKDEIVSEHLTRNIQFFGFESQQKVSASYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFSSIFPECQVDAKVLLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRIADLRESTNDPLSRSVRHRLRKDHGIEGGIPVVFSLEKPKAKLLPFKGPNGEEENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTELAGFQVQTEPIVNFDTDHYHTLHQRLIEHEELVYGTSQQVQVDIEEVMYIVKELWHGRSARDQLVKEVGRGMWRSVNELMLVRWDCEKPASISNLILLKFKEVDEHESRTLDDIKEKEPEFYNSVNAVLKRAEIDFGYAH* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3936 459 CDD YgdL_like 83 317 - -
Amo13g3936 459 Pfam ThiF family 77 339 IPR000594 -
Amo13g3936 459 Gene3D - 67 333 - -
Amo13g3936 459 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 75 334 IPR035985 GO:0008641
Amo13g3936 459 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 1-RELATED 6 456 - -
Amo13g3936 459 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 6 456 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3936 Amo-Chr13 131597822 131603699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3936 117 219 Sulfurtransferasese or Rhodanese AT5G55130 30.097 7.94e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3936 K22132 - gmx:100815445 795.038