Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3935 ATGGTCTTAATGGATGAGAAYCTACACAAGATCCAAGCCACCATTAGAGATCAGCTTATATCAAATTTTGCGGTGTCTCTAAATGAAGGGGATGTGTACTTGATGACCCATTTTACAGTTGTACCGAACACTGGTTTGAACAGGGTAACGAAACATCGGTTCAGACTTTTGTTCCAATACAACACCTCTATTGTTTCTGTGGTATCTCCAAGGATACCTCATTCCGGTCTGTGTTTTGCATCAATAGATGAAATTGATCAAATGACAAAGGACCATAATTTCCTCATTGACTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTGGCATCATATGGGAAGCTGGTCAAAGCAGTGGTGCTAGAAGTCTTTACTGATGGCAAAAGGGTACAATGCAATGTGTTTGGAAATTCTTGTGATCTGTTAGAATATGATAAGTTACAAAAATATCCAAGATCTCCGCTGGTTGTCCTCGAGTCTTTTAAAATCAAAGCAATTGAAGGTGGGGTAATCCTACAGAATGTGATAAATGTCTCTAGGTTATTCATTAATCCTGACATTCCTGAGTCTGTTGAGTTC 585 0.388 MVLMDENLHKIQATIRDQLISNFAVSLNEGDVYLMTHFTVVPNTGLNRVTKHRFRLLFQYNTSIVSVVSPRIPHSGLCFASIDEIDQMTKDHNFLIDFVGIITGVRKERDVASYGKLVKAVVLEVFTDGKRVQCNVFGNSCDLLEYDKLQKYPRSPLVVLESFKIKAIEGGVILQNVINVSRLFINPDIPESVEF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3935 195 Gene3D - 71 195 IPR012340 -
Amo13g3935 195 Pfam Domain of unknown function DUF223 1 85 IPR003871 -
Amo13g3935 195 Gene3D - 1 68 IPR012340 -
Amo13g3935 195 SUPERFAMILY Nucleic acid-binding proteins 1 67 IPR012340 -
Amo13g3935 195 CDD RPA1_DBD_A_like 1 64 - -
Amo13g3935 195 SUPERFAMILY Nucleic acid-binding proteins 79 195 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3935 Amo-Chr13 131576314 131577500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3935 3 195 Core DNA Replication Machinery Family AT5G45400 24.519 4.06e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3935 - K07466 adu:110278870 367.466