Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3919 ATGGAGTTGGACAAGCTTCTAGCCATGCCAGCACTATTAGCACTCCTCCTCCTCTATCTTCATTTCATGAGAAGGAAGATTCGGAATGGGATTCAGAATCTTCCTCCAGGAAGCTCAGGATGGCCAATTGTTGGAGAAACCTTCAAGTTTATCAGCGCGGCTCGTGAGGGAACCCCGGTGAGGTTCATACAAGAGAGAATGGAGAGGTATGATTCAAGGGTGTTCAAGACTTCGTTTCTTGGAGATCCTATGGCAGTGTTTTGCGGCACGGCGGGGAACAAGTTCTTGTTTAGCAATGAGAACAAGAATGTGCAAGTATGGTGGCCAAGCTCTATAAAGAAGCTGYTAAGGTCTTCTTTGGTTAATAAGGTCGGYGATGAAGCAAAGATGACSAGAAGGTTGCTCTTGACCTTTCTCAATCCTGAAATTCTCAGAAATTTCGTGCCTAAAATGGATACCATTGCTCAAATCCACATTAACACTCATTGGCAAGGAAAGGAACAGGTGGTTGTTCATTCCACAGTCCAGAAACACACTTATGCTTTGGCTTGTTCCTTGTTTCTGAGCATTGAAGATCCTCTCCACGATTCAAAGTTTTCGTCGAGATTTCACCGATTCTTAAAAGGCTTGGTTGGCTTCTCCATCAACTTGCCCGGAACAAGATTTCACCAAGCAATGAAAGCTGCCAACGAAATAAGGGAAGAAATAAAAAAGATCATAAAGCAAAGAAAAGTGGATTTGGAAGAGAAAAGAGCGTCACCAAGCCAAGACATTCTCTCACATTTGCTTGCAACACCTGACTCCAATGGAAGGTTTCTAACTGAAATCGAGATCATGGATAACATACTCCTCCTCCTTTTCGCCGGCCACGATACTTCTAGATCCACTCTGTCATCTCTCATGAGGTACCTGGCGCAGCTTCCTCATGTTTATAACAAGGTTTTGGCAGAACAAGTTGAAATTAGCAGAGCAAAAGGGGAAGGGGAATCCCTGCAATGGGAGGATGTTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGTCTTGAGACTATCTCCACCGGTCACCGGTGCTTACAGAGAAGCCTTAAGGGATTTTAGCTATGCTGACTATACCATTGGAAAGGGCTGGAAGTTGCATTGGACAACCTGCTCTTCACACGTGGATCCCAGGCTCTTCGCGAATCCCGAGGCTTTCGACGCGTCGAGGTTTGAAGGGGCAGGCCCTGCGCCGTATTCGTATGTTCCGTTTGGTGGAGGGCCTAGAATGTGTTTGGGGCTAGAGTTTGCAAGGCTAGAGATACTTGTGTTCATGCATCATATTGTGAAACAGTTCAAATGGGATTTGGTTAATCCTAATGAGAAGTTCAAGTATGATCCCATGCTTGAACCTGTAGATGGACTTCCGGTTCTGCTTCACCGTCACCATTGA 1434 0.4512 MELDKLLAMPALLALLLLYLHFMRRKIRNGIQNLPPGSSGWPIVGETFKFISAAREGTPVRFIQERMERYDSRVFKTSFLGDPMAVFCGTAGNKFLFSNENKNVQVWWPSSIKKLLRSSLVNKVGDEAKMTRRLLLTFLNPEILRNFVPKMDTIAQIHINTHWQGKEQVVVHSTVQKHTYALACSLFLSIEDPLHDSKFSSRFHRFLKGLVGFSINLPGTRFHQAMKAANEIREEIKKIIKQRKVDLEEKRASPSQDILSHLLATPDSNGRFLTEIEIMDNILLLLFAGHDTSRSTLSSLMRYLAQLPHVYNKVLAEQVEISRAKGEGESLQWEDVQKMKYSWNVASEVLRLSPPVTGAYREALRDFSYADYTIGKGWKLHWTTCSSHVDPRLFANPEAFDASRFEGAGPAPYSYVPFGGGPRMCLGLEFARLEILVFMHHIVKQFKWDLVNPNEKFKYDPMLEPVDGLPVLLHRHH* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3919 477 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 14 466 - -
Amo13g3919 477 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 PANTHER CYTOCHROME P450 26 14 466 - -
Amo13g3919 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Amo13g3919 477 SUPERFAMILY Cytochrome P450 33 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 Pfam Cytochrome P450 35 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3919 477 Gene3D Cytochrome P450 25 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3919 Amo-Chr13 131140421 131144358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3919 33 397 Cytochrome P450 AT5G36110 44.022 1.46e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3919 - K20667 adu:107480504 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3919 13 131140421 131144358 Amo03g3006 03 122662527 122664206 hybridization