Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3918 ATGACAGAACAAGTCGAAATAAGCAGAWAGAAAGAGGCAGGGGAGTTGTTGCAATGGGAGGATATTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGTCATGAGGCTGTTACCACCTGTTGCGGGTACTTACAGAGAAGCAATAAAGGATTTTAACTATGCTGGCTATACCATTCCCAAGGGCTGGAAGTTGCGCTGGCTCCCTGGCTCGACACACATGGATCCGGCGTATTTTCCGAATCCGGAAGCTTTTGATGCATCAAGATTTGAGGGAGAAGGTCCTGCAGCCTATTCATATGTTCCATTTGGAGGAGGGCCTAGAATGTGTCTGGGACTAGAGTTTGCAAGGATAGAGATACTTGTGTTCATGCATCACATTGTGAAATGGTTCAAATGGGATTTGGTGAATTCTGATGAGAAGTTTAAGTATGATTCCTTGCTTGAGCCAGTCAATGGACTTCCAATTCGGCTTCACCCTCATACTATTATTGATTCAAATTAG 507 0.4339 MTEQVEISRXKEAGELLQWEDIQKMKYSWNVASEVMRLLPPVAGTYREAIKDFNYAGYTIPKGWKLRWLPGSTHMDPAYFPNPEAFDASRFEGEGPAAYSYVPFGGGPRMCLGLEFARIEILVFMHHIVKWFKWDLVNSDEKFKYDSLLEPVNGLPIRLHPHTIIDSN* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3918 168 PRINTS P450 superfamily signature 30 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PRINTS P450 superfamily signature 102 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PRINTS P450 superfamily signature 111 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PRINTS B-class P450 signature 30 41 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PRINTS B-class P450 signature 111 122 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PRINTS B-class P450 signature 102 111 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PRINTS B-class P450 signature 75 90 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PRINTS B-class P450 signature 47 74 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 Gene3D Cytochrome P450 3 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 2 160 - -
Amo13g3918 168 PANTHER CYTOCHROME P450 26 2 160 - -
Amo13g3918 168 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 104 113 IPR017972 GO:0005506|GO:0016705
Amo13g3918 168 SUPERFAMILY Cytochrome P450 6 161 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3918 168 Pfam Cytochrome P450 6 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3918 Amo-Chr13 131139278 131140161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3918 6 164 Cytochrome P450 AT3G19270 38.994 1.78e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3918 - K20667 adu:107480504 346.28