Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3917 ATGGAGGTGGCCAAGTTTCTAGGCTTGCCAGCACTTTTGTTTCTCTTGGTCCTTTGTTTTCATCTGATAAGAAAATTTGCGAAACTGGGAAAGAAGCCAAACCTTCATCTTCCCCCTGGAAGCTTAGGATGGCCGATGGTCGGAGAAACCTTTGAGTTTATGCGGGAAGCTAAGAAGGGAAACATGTCAAGGTTCACACTAGAGAGAATGGAGAAATATGACTCCAGGGTGTTCAAGACTTCATTTCTTGGAGATCCAATGGCTGTGTTTTGCGGCATGGCCGGGAACAAGTTCTTGTTCAGCAATGAGAACAAACAAGTCCAACTATGGTGGCCCTCTTCAATAAGGAAGCTGTTAAGGACATCTCTGGTTACTAAGATTGGTGAAGATGCAAAGTTGACTAGAAAGTTGCTATTGAGCTTTCTTAGTGGAGAAGCACTCAGGAATTTCGTGCCCAAAATGGATAGCATTGCTCGGAGCCATTTAAACACACATTGGAAAGGAAAGGAGCAGGTGATTGTGTATTCCACAACACAGCTATACACATATTCATTGGCTTGTTGCTTATTTTTGAGCATTGAAGACCCTGCCCATGTATCAAAGTTTTCATCCAAGTTTGAAGAGCTTGTGAAAGGCATGCTTGGCTTCCCCGTCAACTTGCCCGGAACAAAATTCCATCAAGCCATGAAAGCCGCAGATGAAATAAGGAAAGAGATTAAAATGCTTGTAAGGCAAAGGAAAGTGGATTTGGAAGAGAAGGCGTCTCCATCACCTAGCCAAGACCTTTTGTCACATTTGCTTGTCACACCTGATGCCAGTGGAAGATTCATGCCCCAAGAGGAGATCATTGACATCATGCTACAGCTGCTTTTTGCGGGCCATGACACTTCTCGGTCGGCCTTATCGTCTATCATGAAGTATCTTGGCGAAATGCCTCAAGTTTATGAACAGGTTTTGGAAGAACAACTTGACATAAGCCGAGGGAAAGGGACAGGGGAGTTGTTGCAATGGGATGATGTTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGTCATGAGGCTATCACCACCTGTTGCTGGTGCTTACAGAGAAGCAACAGGGGATTTTACCTTTGCTGGCTATACCATTCCTAAGGGATGGAAGTTGAACTGGACCACTTTCTCGACACACATGGATCCGGCACACTTTCCGAATCCCAAAGTTTTTGATGCATCGAGGTTTGAAGGGGAAGGTCCTGCACCCTATTCATATGTTCCATTTGGAGGAGGGCCTAGAATGTGTTTGGGACTAGAGTTTGCAAGGCTAGAGATACTTGTGTTCATGCATCACATTGTGAAACAATTCAAGTGGGATTTGATGAATCCAAATGAGAAGTTTAAGTATGATCCCTTGCTTGAGCCAGAAAATGGACTTCCAATTCGGCTTCACCCTCGCCCTCTCTAA 1449 0.4438 MEVAKFLGLPALLFLLVLCFHLIRKFAKLGKKPNLHLPPGSLGWPMVGETFEFMREAKKGNMSRFTLERMEKYDSRVFKTSFLGDPMAVFCGMAGNKFLFSNENKQVQLWWPSSIRKLLRTSLVTKIGEDAKLTRKLLLSFLSGEALRNFVPKMDSIARSHLNTHWKGKEQVIVYSTTQLYTYSLACCLFLSIEDPAHVSKFSSKFEELVKGMLGFPVNLPGTKFHQAMKAADEIRKEIKMLVRQRKVDLEEKASPSPSQDLLSHLLVTPDASGRFMPQEEIIDIMLQLLFAGHDTSRSALSSIMKYLGEMPQVYEQVLEEQLDISRGKGTGELLQWDDVQKMKYSWNVASEVMRLSPPVAGAYREATGDFTFAGYTIPKGWKLNWTTFSTHMDPAHFPNPKVFDASRFEGEGPAPYSYVPFGGGPRMCLGLEFARLEILVFMHHIVKQFKWDLMNPNEKFKYDPLLEPENGLPIRLHPRPL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3917 482 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 17 470 - -
Amo13g3917 482 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PANTHER CYTOCHROME P450 26 17 470 - -
Amo13g3917 482 Pfam Cytochrome P450 38 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 Gene3D Cytochrome P450 27 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 SUPERFAMILY Cytochrome P450 34 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3917 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3917 Amo-Chr13 131106118 131108448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3917 36 384 Cytochrome P450 AT5G36110 43.182 4.14e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3917 - K20667 adu:107480504 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3917 13 131106118 131108448 Amo03g3004 03 122631945 122634635 hybridization