Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3916 ATGACTGAAACCGAGATTATTGACAACCTGCTGCAGCTGCTTTTCTCTGGCCACAACACTACTAGATCGGTTATATCGTCTATCATGAAGTATCTTGGCGACCTGCCTGAAGTATATGAACAGGTTTTGAAAGGTTTACAACAAAATCCTTCAACATTTTACATTTTTTCTACTGCTATTCCTGATAAACCTTCTTGTCCAGAATTTAGATCAAAACAAATGTTGTTTTGTTTTGTCTTCATGCCAGAACAACTCGAAATTAGCAGAGGGAAAGGGACAGGGGAATTGTTACAATGGGAGGATGCTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAGGTCATGAGGCTATCCCCACCAGTGAATACTAATTTCAAAGAAGCAATAAGGGATTTTAACTATGCTGGCTATACCATTCCTAAAGGGTGGAAGCTGCGTTGGGCCACGTGTTCAACACACATGGATCCAGAATACTTCCCGAATCCGGAAGCTTTTGATGCATCAAGGTTTGAAGGGGAAGGTCCTACAGCCTATTCATATGTTCCATTTGGGAGAGGGCCTAGAATGTGTCTGGGAATAGAGCTTGCAAGGTTGGAGATACCTGTGTTCATGCATCACATTGTGGAACGGTTCAAGTGGGATTTGGTGAATCCTGATGAGAAGTTTAAGTATGATCCCTTGCTTGAGCCAGTAAAAGGACTTCCGGTTCGGCTACACCCTCGCCATGTCTAG 735 0.4272 MTETEIIDNLLQLLFSGHNTTRSVISSIMKYLGDLPEVYEQVLKGLQQNPSTFYIFSTAIPDKPSCPEFRSKQMLFCFVFMPEQLEISRGKGTGELLQWEDAQKMKYSWNVASEVMRLSPPVNTNFKEAIRDFNYAGYTIPKGWKLRWATCSTHMDPEYFPNPEAFDASRFEGEGPTAYSYVPFGRGPRMCLGIELARLEIPVFMHHIVERFKWDLVNPDEKFKYDPLLEPVKGLPVRLHPRHV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3916 244 PANTHER CYTOCHROME P450 26 1 44 - -
Amo13g3916 244 PANTHER CYTOCHROME P450 26 81 232 - -
Amo13g3916 244 SUPERFAMILY Cytochrome P450 1 242 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 Pfam Cytochrome P450 87 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 184 193 IPR017972 GO:0005506|GO:0016705
Amo13g3916 244 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 81 232 - -
Amo13g3916 244 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 1 44 - -
Amo13g3916 244 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 PRINTS P450 superfamily signature 110 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 PRINTS P450 superfamily signature 182 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 PRINTS P450 superfamily signature 191 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 PRINTS E-class P450 group I signature 149 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 PRINTS E-class P450 group I signature 181 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 PRINTS E-class P450 group I signature 191 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3916 244 Gene3D Cytochrome P450 1 243 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3916 Amo-Chr13 131104400 131105810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3916 1 237 Cytochrome P450 AT3G19270 33.755 1.99e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3916 - K20667 adu:107480504 328.946