Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3896 ATGAATTATCCTGATCCATTGATTGATGACTTAATGAAGGTGGATAGGATTGAGGAGAGTAGTGGGAGTGTGAGGTTGTTGGCAAGAAAAGGGAGCAACAGCAGTGGTGGGAGCAGTGAATCTTCAAGGTGGGTTGATGGCAGTGAAGTGGTGGATTGGGATGAGGTTCCTCCATGGTCAAGGCTCCATGATAGTGATGGTAGAGAAGGGTATGGAACAACAATTAGGAGGAGGCTTGTTAAGAAGCCCAAAAGGGTTGATTCATTTGATGTTGAAGCCATGGAAATTGGTGGAGCTCATGGTCACCACACTAAGGATATGACCCTTTGGCCCACCCTTCTATTAGCATTTAAGACTCTTGGTGTTGTATATGGCGATATGGGAACAAGTCCTCTATATGTTTTTTCTGATGTCTTCAGCAAGGTTCCAATTGAATCAGATGTTGATGTCTTGGGGGCTTTATCATTGGTAATGTACACAATAGCTCTTGTTCCACTAGCCAAGTATGTTTTTATAGTGCTCAAAGCAAATGATAATGGAGAAGGAGGAACGTTTGCGCTATACTCGCTGATTTGTAGGTATGCAAATGTGAATATGCTACCAAATCGTCAACAAGCTGACGAGCACATATCTAGTTTTAAGCTCAAACTGCCTACTCCAGAGCTAGAAAGGGCTTTGAAAATAAAGGAGACCTTGGAAAGAAGAGCAACTTTGAAAAATATTTTGTTGGTTTTGGTTTTGTTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTAATGTCTGCCATAAGTGGTCTACAAGGTCAAGTAAAAGGATTTGGTACAGGTGCTTTGGTTGGTGTTTCAATTGCAGTCCTAGTAGCTTTGTTCAGCATCCAACGTTTTGGTACCAGTAAAGTGGGTTTCATGTTTGCTCCAGTTCTTGCTTTATGGTTCTTTTCTCTGGGTTCTATTGGACTATATAACATATTTAATTATGATGTCACGGTTCTGAGAGCTATCAATCCAGCTTATGTATATTATTTCTTCAATAAAAATGGCAAAGGTGCATGGTCAGCTCTTGGTGGTGCAGAAGCAATGTTTGCAGACCTGGGTCATTTTTCTGTACCAGCAATACAGATTGCTTTCACTAGTGTGGTATTTCCTTGTCTTCTCCTAGCTTATATGGGCCAAGCTGCTTATTTGATGAAGAATCCCCATTCTTATTCAAGGATATTCTATGATTCTGTTCCAGAAAGTCTCTTCTGGCCAGTGTTTGTTGTAGCCACACTAGCTGCTATGATTGCCAGTCAAGCAATGATATCGGCTACATTTTCGTGTGTAAAGCAATCTATGGCTTTAGGATGCTTCCCCAGGCTCAAGATAATTCATACCTCGAGAAAGTTCATGGGACAAATTTACATCCCTGTAATGAACTGGTTTCTAATGATCATGTGCATAATTGTTGTTTCAATCTTCCAAAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTTAGCACTGCCTTGGTGACACTTGTAATGCTTCTGATTTGGCAGACTAATCTGTTTTTGGCGCTGTGTTTCCCATTACTATTTGGTTCCGTGGAGCTGATTTACATGTCTGCTGTCCTCTCGAAGCTCTTTGAAGGCGGCTGGCTTCCTCTTGCCTTTGCTACTTTCTTCCTCTCCGTGATGTACACGTGGAACTATGGCAGTGTATTGAAGTACCGGAGCGAAGTCAGAGAGAAAGTCTCATCAGACTTGATGCTTGATCTTGGCTCCAATCTTGGAACACTAAGAGTTCCCGGAATTGGATTGTTATATAATGAGCTTGTCCAAGGCATTCCCTCCATTTTCTTGCAGTTCTTGCTAAGCCTTCCTGCTATTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTTCCAATCCCTGTGGTTCCTCAGGAGGAAAGGTTTCTGTTTCGAAGAGTTTGCCCGAAAGATTACCATATGTTCCGGTGTGTTGCAAGGTATGGTTACAAAGATGTAAGGAAAGAAGATCACCACGCATTCGAGCAACTTCTCATTGAGAGCCTTGAGAAATTCTTGAGAAGGGAAGCTCAAGAAGCTGCCTTGGAATTGGAGGGTGCATTAACCGAAGAAACGGATAATGTCTCAGTGAAATCAATGGATACTGAACATCATCCTGATACAGATGAGCTTCGGATTCCACTTATGCAAGGTCAAAATTTAGAAGGAGAAGGAACTACTTCTACCTCTAAGGAACCTGCATCATTAGCATTGCCATTAGCATTACCTTCCAGTTATATGTCATCTTCGGCCGAAGATCCTGGTCTCGAGTATGAGCTCTCGGCCCTAAGAGAAGCAATGGAATCAGGATGCACCTATTTGCTTGGACATGGAGATGTGAGGGCAAAGAAGAACTCTTTCTTCTTTAAGAAGTTAGTGATAAACTATTTCTATGGATTTCTTAGGAAGAACTGCAGAGGCGGCACGGCAAACATGAAAGTCCCTCACACCAATATCATTCAAGTTGGGATGACATATATGAAAGAATCATGGAGATCAGTTCTGACACTGGCATATCAGAGCCTTGGAGTGGTGTATGGTGAAATAAGCACTTCACCACTTTTTGTGTACAGAAACACATTCTCTGAAGACATTGGTCACACTGACACCAATGAAGAGATTTTTGGCGTTCTGTCTTTGGTGTTCTGGACTTTAACATTGGTTACTCTTGTTAAGTATGTGTTCATAGTGCTTAGAGCTGATGACAATGGTGAAGGAGGCACATTTGCACTCTACTCTTTGCTCTGCCGCCATGCCAGGCTTCGATCATTCCATAATTGCCAGCTGGAGGATGAGGAGCTCTCCGAGTACCGGAGTAGCCGCTGCTTTGGCGCCGATGTGCCGGAGAGAAGCCTTAACTGTAGGGTGAAGAACACCTTGGAGAAGCACAAGTTCTTGCAGGGTGTTCTGTTGGTTCTTGCTCTCATTGGAACTTGCATGGTCGTTGGTGTTGGGGTGCTTAAACCTGCTATTTCTGTTTTCTCAGCTGTGTCTGGCCTTGAGCTTTCAGTGTCCAAGGAGCATCACAGATATGTAGAAGTTCCAGCTGCATGTTTGATATTGATAGGCTTGTTTGCACTTCAACGTTATGGTACACACAGGGTTGGCTTCATCTTCGCCCCCATAGTTCTTACATGGCTTCTCTGCATCGCCGCCATCGGCATATACAACATTTACTATTGGAACCCTCATGTATACAAAGCACTCTCCCCATATTATGTTTTCCAGTTCATAAAGAAAACAAAGACAGCAGGGTGGATGTCCCTTGGTGGAATTTTACTATGCATAACAGGATCAGAGGCCATGTTTGCTGATCTTGGACACTTTTCGCCATTATCCATCAAGATTGCCTTCACTGCTGTGGTTTATCCATGCTTAACTCTAGCATACATGGGACAAGCTGCATATTTTTCGAGACATCACGACATCAAACACGAGTATGAGTTTGGGTTCTATGTATCTGTCCCAGGGAAGTTGAGGTGGCCTGTTGTGGTGATAGCAATACTAGCCGCAGTTGTTGGCAGCCAATCCATCATCACAGGAACTTTCTCAATTATCAAGCAATGCTCAGCACTAAACTGCTTCCCAAGGGTTAAAGTGGTTCACACATCTTCAAAGATTCATGGCCAAGTTTACATCCCTGAGATAAATTGGCTATTGATGCTGATGTGTTTGGCTGTAACTATTGGTTTCGGAGACATAAGGCGTCTTGGCAATGCATCAGGTTTGGCTGTCATCTCAGTCATGCTGGTAACTACCTGCTTGATGTCACTGGTAATTATACTGTGCTGGAAGCAGAATGTTTTGCTAGCACTGGCCTTTGTTGTTTTCTTTGGAACAATTGAGGCTGTGTTCTTCTCAGCTTCCATTATGAAATTCTTTGAAGGAGCATGGGTACCAATTGTTATGTCAGTTGTGTTTCTTTCAGTAATGTATAGCTGGCACTATGGAACTGTAAAGAAGTATGAATTGGATGTCCAAAACAAGGTTTCAGTGAACTGGCTACTGAGCCTTGGACCAAGCTTAGGCTTTGTCCGAGTTGGCGGCATTGGGCTTGTCCACACAGAGCTAGTTTCCGGCATTCCAGCAATATTCTCACACTTTGTAACCAATTTGCCTGCTTTCCACCAAGTGCTGGTGTTCCTCTGCATCAAGCATGTTCCAATTCCACATGTTAGACCCCAGGAGCGGTTTCTAGTAGGCAGAGTAGGGCCAAGAAACTTCAGAATCTACCGGTGTATCGTCCGATATGGATACCGTGACATCCACAAAGACGACGATGAGTTCGAGAAAGACCTTGTATGCAGCATAGCTGAGTTCATAAGAACCGGGAATTCAAGCAATGAGGGTGAGAAGGATGATCATCATGATGTGATGGCAGTTGTAGGCACATGTTCTAGTTCTACTCATCACATTATTATGAGTGATGAGAATGGAACGTTAGAACACAAGGGACAAAAGAAAAAGGTACGGTTTATTGTGCCGGAGAAGCAGAAGATGGAGAGTGATGCAATGGAGGAGTTGAAGGATTTAATGGAAGCTAGGGAAGCTGGGGTGGCATACATTATAGGACATTCATACATGAGAGCCAAACCAGGTTCCAGCACTTTGAAAAAATTGTTGGTTAATTTTGGTTATGAATTGTTAAGGAAAAATAGRAGYGCACCCTCCTATGTACATAGTGTACCTCATGCATCAGCTTTAGAGGGAGAAAATAGATGGAAAGTGGAAGGCAATATGTAA 4833 0.4291 MNYPDPLIDDLMKVDRIEESSGSVRLLARKGSNSSGGSSESSRWVDGSEVVDWDEVPPWSRLHDSDGREGYGTTIRRRLVKKPKRVDSFDVEAMEIGGAHGHHTKDMTLWPTLLLAFKTLGVVYGDMGTSPLYVFSDVFSKVPIESDVDVLGALSLVMYTIALVPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNMLPNRQQADEHISSFKLKLPTPELERALKIKETLERRATLKNILLVLVLLGTSMIIGDGILTPAISVMSAISGLQGQVKGFGTGALVGVSIAVLVALFSIQRFGTSKVGFMFAPVLALWFFSLGSIGLYNIFNYDVTVLRAINPAYVYYFFNKNGKGAWSALGGAEAMFADLGHFSVPAIQIAFTSVVFPCLLLAYMGQAAYLMKNPHSYSRIFYDSVPESLFWPVFVVATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVMNWFLMIMCIIVVSIFQSTTDIANAYGIAEVGVMMVSTALVTLVMLLIWQTNLFLALCFPLLFGSVELIYMSAVLSKLFEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVREKVSSDLMLDLGSNLGTLRVPGIGLLYNELVQGIPSIFLQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRREAQEAALELEGALTEETDNVSVKSMDTEHHPDTDELRIPLMQGQNLEGEGTTSTSKEPASLALPLALPSSYMSSSAEDPGLEYELSALREAMESGCTYLLGHGDVRAKKNSFFFKKLVINYFYGFLRKNCRGGTANMKVPHTNIIQVGMTYMKESWRSVLTLAYQSLGVVYGEISTSPLFVYRNTFSEDIGHTDTNEEIFGVLSLVFWTLTLVTLVKYVFIVLRADDNGEGGTFALYSLLCRHARLRSFHNCQLEDEELSEYRSSRCFGADVPERSLNCRVKNTLEKHKFLQGVLLVLALIGTCMVVGVGVLKPAISVFSAVSGLELSVSKEHHRYVEVPAACLILIGLFALQRYGTHRVGFIFAPIVLTWLLCIAAIGIYNIYYWNPHVYKALSPYYVFQFIKKTKTAGWMSLGGILLCITGSEAMFADLGHFSPLSIKIAFTAVVYPCLTLAYMGQAAYFSRHHDIKHEYEFGFYVSVPGKLRWPVVVIAILAAVVGSQSIITGTFSIIKQCSALNCFPRVKVVHTSSKIHGQVYIPEINWLLMLMCLAVTIGFGDIRRLGNASGLAVISVMLVTTCLMSLVIILCWKQNVLLALAFVVFFGTIEAVFFSASIMKFFEGAWVPIVMSVVFLSVMYSWHYGTVKKYELDVQNKVSVNWLLSLGPSLGFVRVGGIGLVHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKHVPIPHVRPQERFLVGRVGPRNFRIYRCIVRYGYRDIHKDDDEFEKDLVCSIAEFIRTGNSSNEGEKDDHHDVMAVVGTCSSSTHHIIMSDENGTLEHKGQKKKVRFIVPEKQKMESDAMEELKDLMEAREAGVAYIIGHSYMRAKPGSSTLKKLLVNFGYELLRKNRSAPSYVHSVPHASALEGENRWKVEGNM* 1611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3896 1610 Coils Coil 1527 1547 - -
Amo13g3896 1610 Pfam K+ potassium transporter 116 682 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g3896 1610 Pfam K+ potassium transporter 869 1451 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g3896 1610 PANTHER POTASSIUM TRANSPORTER 12-RELATED 25 857 - -
Amo13g3896 1610 TIGRFAM kup: potassium uptake protein 867 1598 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g3896 1610 TIGRFAM kup: potassium uptake protein 115 856 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g3896 1610 PANTHER POTASSIUM TRANSPORTER 12-RELATED 860 1597 - -
Amo13g3896 1610 MobiDBLite consensus disorder prediction 723 743 - -
Amo13g3896 1610 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 25 857 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g3896 1610 Coils Coil 704 724 - -
Amo13g3896 1610 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 860 1597 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g3896 1610 MobiDBLite consensus disorder prediction 726 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3896 Amo-Chr13 130707702 130722183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3896 14 857 Inorganic Solute Cotransporters AT1G60160 73.450 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3896 K03549 - gmx:100814419 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3896 13 130707702 130722183 Amo13g3896 13 130707702 130722183 ECH
Amo13g3896 13 130707702 130722183 Amo20g0576 20 7317190 7323656 PCT
Amo13g3896 13 130707702 130722183 Amo10g0330 10 3348410 3354247 PCT
Amo20g0576 20 7317190 7323656 Amo13g3896 13 130707702 130722183 PCT
Amo10g0330 10 3348410 3354247 Amo13g3896 13 130707702 130722183 PCT