Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3846 ATGATTTGTATAGCAATATTTCTAGTCTCTCTTGCTTGTCTCTGGCTATGGGGATTCACCAACAAGAACAAGAAATTACCTCCTGGTCCAAGAGGGTTACCAATTTTGGGTAGCCTTCATAAGTTGGGAGATAATCCTCATCTTGATCTTCACAAACTAGCACAAAAACATGGACCAATCATGTACCTGCGCCTAGGTTTGGTGCCAACCATTGTTGTCTCTTCTCCACAAGCTGCTGAACTCTTTCTTAAAACCCATGACCTTGTTTTTGCAAGTAGACCACCCCATGAAGCTGCAAAGTACATTGCATGGGAGCAGAGGAACATGAGTTTTGGTGAATATGGTCCTTATTGGCGCAACATGCGAAAGATGTGCACCTTGGAACTACTAAGCCAAACAAAGATTAACTCATTCAGACGCATGAGGCAAGAGGAGGTTGAATCATTGATCAACGTTCTTAGAGAAGCAGCAAAAGATGGAGTTGCTGTGGATGTCAGTGCTAAGGTTTCAACAGCGAGTGCTGACATGAGTTGTAGAATGGTTTTTGGGAAGAAATACGATGACAAAGACTTGGATGAGAAGGGTTTCAAGAGTGTTATACAAGAAGGGATGCAATTATCGGCAACTCCAAACATAGGTGATTATATTCCTTATATTGGTAAACTTGATCTTCAAGGCTTAACTAGGCGCATGAAGGCTGTGGGGAAAAAATTTGATGAGTTTTTTGAGAAAGTTATTGATGACCACTTGCAATCATCTGAGAACAGAGAAGATAAAGTTAAGGACTTTGTGGATGTCATGTTGGGCTTTCTAGGCACTGAGGAATCTGAATACCGTCTTGAACGCCCTAATATCAAAGCCATATTGCTGGATATGCTGGCAGGTTCAGTGGACACATCAGCAACGGCAATAGAGTGGGCACTTTCAGAGCTAATAAAGCATCCAAGAGTGATGAAAAAACTTCAAATAGAGTTAGAATCTGTGGTTGGTATGAAGAGAATGGTGGAGGAGTCAGACTTAGACAAGTTAGAATATTTGGACATGGTCATCAAGGAAACCATGAGGATCCATCCAGTGGCACCATTACTAATACCACACCAATCTATGGAAGATTGCATGGTTGGAGATTTCTTCATACCCAAGAAATCAAGAGTCATAATAAATGCATGGGCAATCATGAGGGACCCAAGTGCTTGGAGTGAGCCAGAGAAGTTCTGGCCGGAGAGATTTGAGGGAAGAGAGATTGACATCAAAGGTAGAGATTTCCAATTTATACCATTTGGGTCTGGGAGAAGAGGATGCCCTGGATTGCAGTTAGGTCTAACAGTGGTTCGGTTGGTGGTGGCACAACTTGTGCATTGCTTTGATTGGAAGTTACCAAATAAGATGTTGGCATCTGAATTGGACATGACTGAGGAGTTTGGTCTCACTATGCCAAGGGCCAATCATTTATTTGCGATACCTACTTATAGGCTTCAGAATGAAAGTGGTTAA 1494 0.421 MICIAIFLVSLACLWLWGFTNKNKKLPPGPRGLPILGSLHKLGDNPHLDLHKLAQKHGPIMYLRLGLVPTIVVSSPQAAELFLKTHDLVFASRPPHEAAKYIAWEQRNMSFGEYGPYWRNMRKMCTLELLSQTKINSFRRMRQEEVESLINVLREAAKDGVAVDVSAKVSTASADMSCRMVFGKKYDDKDLDEKGFKSVIQEGMQLSATPNIGDYIPYIGKLDLQGLTRRMKAVGKKFDEFFEKVIDDHLQSSENREDKVKDFVDVMLGFLGTEESEYRLERPNIKAILLDMLAGSVDTSATAIEWALSELIKHPRVMKKLQIELESVVGMKRMVEESDLDKLEYLDMVIKETMRIHPVAPLLIPHQSMEDCMVGDFFIPKKSRVIINAWAIMRDPSAWSEPEKFWPERFEGREIDIKGRDFQFIPFGSGRRGCPGLQLGLTVVRLVVAQLVHCFDWKLPNKMLASELDMTEEFGLTMPRANHLFAIPTYRLQNESG* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3846 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Amo13g3846 497 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 Gene3D Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PANTHER CYTOCHROME P450 93A3-LIKE 2 493 - -
Amo13g3846 497 Pfam Cytochrome P450 27 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 SUPERFAMILY Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 493 - -
Amo13g3846 497 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3846 497 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3846 Amo-Chr13 129235061 129236972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3846 8 489 Cytochrome P450 AT3G26300 39.715 3.13e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3846 K20562 - gmx:100809526 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3846 13 129235061 129236972 Amo03g2946 03 121392974 121395011 hybridization