Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3845 ATGTTTTCCATAGCAATATTCTTGGTTTCTTTAACTTGTCTGTGGCTATGGGGATGCAGCAAGAAGGGTAAGAGATTACCTCCTGGTCCAAGAGGATTGCCAATCTTGGGGAGCCTTCACAAGCTGGGAGCTAACCCCCATCGCGTTCTGCACAAACTAGCACAAAAACATGGACCCATCATGTACCTGCGCCTAGGTTTTGTGCCAACCATTGTTGTTTCTTCATCCCAAGCTGCTGAATTGTTCCTCAAAACACATGACCATGTCTTTGCTAGCAGACCACCTATTGAAGCTGCAAAGTACATCTCTTGGGAGCAGAGAAATATGGTTTTTGCTGAATATGGCCCTTACTGGCGCAACATGCGTAAGATGTGCACATTGGAATTACTGAGCCACACCAAAATCAACTCCTTCAAAAGCATGAGGCAAGAGGAGGTTGACCTATTTATCAAGCTTATGAGAGAAACCGCCAGTGATGGAGTTGCTGTTGATCTTAGTGCCAAGGTTGCAGCACTAAGTGCAGACATGAGTTGTAGAATGATTTTGGGAAAGAAGTACATGGACGACGACTTGGACGAGAAAGGGTTCAAAGCTGTGATGCAAGAGATATTGTATTTGGCAGCAACTCCAAACATAGGTGACTTTATTCCTTACATAGGTGCACTTGATCTTCAAGGGTTAATTAAGCGCATGAAGAAAGTGCGCAAAATCTTTGATGACTTCCTTGACAAAGTTATACATGAGCACATGCTATCAGAAAACAAAAAAGACAAAGCTAAGGACTTTGTGGATGTCATGTTGAGCTTTGTTGGCACTGAAGAATCTGAATATCGTATGGAACAGCCTAATATCAAAGCAATATTGTTGGATATGCTGGTTGGTTCAATGGACACTTCAGCTACAGCAATTGAGTGGGCACTTTCAGAGCTAATAAAGCATCCAAGGGTGATGAAGAAAGTTCAAATGGAGTTGGAATCTGTGGTGGGTTTGAATAGGGTGGTGGAGGAGTCAGACTTGGACAAATTGGAGTATTTAGACATGGTCATCAAGGAAACCATGAGGATTCATCCAGTGGGACCATTACTAATACCACACCAATCTGTGGAAGATTGCATGGTTGCAGATTTCTTCATACCCAAAAATTCCAGGGTGATAATAAATGCATGGACAATTATGAGAGACCCAAGTGCTTGGACTGAGCCAGAGGAATTCTGGCCAGAGAGATTTGAGGGACAAGACATCGATGTTAAAGGGAAACACTTCCAACTGATACCATTTGGGTCTGGCAGAAGAGCATGTCCTGGATTACAGTTAGGGCTAACTGTGGTTCGATTAATGGTGGCACAACTTGTGCATTGCTTTGATTGGAAGTTACCAAATGGGATGTTGCCAAGTGAGTTGGACATGAATGAGGTGTTTGGCCTGACAATGCCTAGGGCCAATAATCTATTTGCCATTCCTACTTATCGGCTCAACAATGAAAGTGCAATAATTTTTTTTTCACTTATTTGTCTGTGGCTATGGGGATCCAACAACAAGGCTAAGAGATTACCTCCTGGTCCAAGAGGGTTGCCAATCTTGGGAAGCCTTCACCTCTTGGGGGGAAATCCTCATCGTGATCTTCACCGGCTAGCACAAAAATATGGATCTATCATGCACTTGCGCCTAGGTTTTGTTCCCACCATAGTTGTTTCTTCACCCCAAGCTGCTGAATTGTTCCTTAAGATCCATGACCATGTCTTTGCAAGTAGACCACCTAGTGAAGCTGCAAAGTACATCTTTTGTGGGCAGAGGGACATTGCCTTTGGTGAATACGGTCCTTATTGGCGCAACATGCGTAAGATGTGCACCTTGGAACTACTAAGCCAAACAAAGATCAACTCTTTCAGAAGCATGAGGCAAGAGGAGATTAACTTGTTTATCAAGCTTCTGAGAGATGCAGCCAATGATGGTGTTGCCGTTGATGTTAGTGCCAAGATTGCAACACTGAGTGCTAACATGAGTTGTAGAATGGTTCTGGGGAAGAAATACATGGATCAGGACATGGATAAAAAAGGGTTCAAATCTGTGATGCAAGAGTCATTGCGTTTAGCCGCCGTTCCAAACATAGGTGACTATATTCCGTATGTTGGTGCACTTAACCTTCAAGGATTAACTAAGGGCATGAAGGCAACGGGGAAAATATTTGATAACTTTTTTGAGAAAGTTATTGACGAGCACATTCAATCAGAGAGCAAAGAAGACAAGGTCAAGGACTTTGTGGATGTCATGTTGGGCTTTCTTGGCACTGAAGAATCTGATTATCGTGTTGATCGCCTGGATATCAAAGCCATATTGCTGGATATGATGCTGGCTTCAACAGATACTTCAGCTGCAGCAATAGAGTGGGCACTTTCAGAGCTAATAAAGCATCCAAGGGTGATGAAGAATCTTCAAATGGAGTTGGAATCTGTGGTGGGAATAAAGAGGGTAGTGGAGGAATCAGACTTGGACAAATTGGAGTATTTGGACATGGTCATCAAGGAAACCATTAGGATCCATCCAGTGGGACCATTACTAATACCACACCAATCCATGGAAGATTGCAAGGTTGGAGATTTCTTCATACCCAAGAAATCCAGGGTGATAATAAATGCATGGGCAATTATGAGAGATCTAAGTGCTTGGATTAAGCCAGAAGAATTTTGGCCAGAAAGGTTTGAGCGAATAGACGTTGATTTTAGAGGGAGAGACTTCCGATTTATACCATTTGGATCTGGCAGAAGAGGATGCCCTGGAATACAGCTAGCCCTAACTGTTGTCCGGTTAGTGGTGGCCCAGCTTGTGCATTGCTTTGATTGGAAGTTACCGAATAACTTGTTGCCAAGTGAATTAGACATGAGTGAGGAGTTTGGCCTCTCAATGCCTAGGGCCAACCATCTATTTGCCATTCCTTCTTATCGTCTTCACAATGAAAGGGATATTTCTTCTATGCATGATGTGCTGGTTGGTTCAATGAACAGTTCAGCTACAGCAATTGAGTGA 3024 0.4319 MFSIAIFLVSLTCLWLWGCSKKGKRLPPGPRGLPILGSLHKLGANPHRVLHKLAQKHGPIMYLRLGFVPTIVVSSSQAAELFLKTHDHVFASRPPIEAAKYISWEQRNMVFAEYGPYWRNMRKMCTLELLSHTKINSFKSMRQEEVDLFIKLMRETASDGVAVDLSAKVAALSADMSCRMILGKKYMDDDLDEKGFKAVMQEILYLAATPNIGDFIPYIGALDLQGLIKRMKKVRKIFDDFLDKVIHEHMLSENKKDKAKDFVDVMLSFVGTEESEYRMEQPNIKAILLDMLVGSMDTSATAIEWALSELIKHPRVMKKVQMELESVVGLNRVVEESDLDKLEYLDMVIKETMRIHPVGPLLIPHQSVEDCMVADFFIPKNSRVIINAWTIMRDPSAWTEPEEFWPERFEGQDIDVKGKHFQLIPFGSGRRACPGLQLGLTVVRLMVAQLVHCFDWKLPNGMLPSELDMNEVFGLTMPRANNLFAIPTYRLNNESAIIFFSLICLWLWGSNNKAKRLPPGPRGLPILGSLHLLGGNPHRDLHRLAQKYGSIMHLRLGFVPTIVVSSPQAAELFLKIHDHVFASRPPSEAAKYIFCGQRDIAFGEYGPYWRNMRKMCTLELLSQTKINSFRSMRQEEINLFIKLLRDAANDGVAVDVSAKIATLSANMSCRMVLGKKYMDQDMDKKGFKSVMQESLRLAAVPNIGDYIPYVGALNLQGLTKGMKATGKIFDNFFEKVIDEHIQSESKEDKVKDFVDVMLGFLGTEESDYRVDRLDIKAILLDMMLASTDTSAAAIEWALSELIKHPRVMKNLQMELESVVGIKRVVEESDLDKLEYLDMVIKETIRIHPVGPLLIPHQSMEDCKVGDFFIPKKSRVIINAWAIMRDLSAWIKPEEFWPERFERIDVDFRGRDFRFIPFGSGRRGCPGIQLALTVVRLVVAQLVHCFDWKLPNNLLPSELDMSEEFGLSMPRANHLFAIPSYRLHNERDISSMHDVLVGSMNSSATAIE* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3845 1007 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Amo13g3845 1007 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS P450 superfamily signature 785 802 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS P450 superfamily signature 838 849 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS P450 superfamily signature 924 935 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PRINTS P450 superfamily signature 915 924 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 Gene3D Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 SUPERFAMILY Cytochrome P450 518 978 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 Pfam Cytochrome P450 27 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 Pfam Cytochrome P450 518 966 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 492 - -
Amo13g3845 1007 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 498 983 - -
Amo13g3845 1007 PANTHER CYTOCHROME P450 93A3-LIKE 4 492 - -
Amo13g3845 1007 PANTHER CYTOCHROME P450 93A3-LIKE 498 983 - -
Amo13g3845 1007 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 917 926 IPR017972 GO:0005506|GO:0016705
Amo13g3845 1007 SUPERFAMILY Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3845 1007 Gene3D Cytochrome P450 508 978 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3845 Amo-Chr13 129227671 129233714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3845 525 982 Monolignol Biosynthesis Gene Families AT4G36220 41.387 2.94e-122 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3845 K20562 - sspl:121786580 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3845 13 129227671 129233714 Amo03g2943 03 121374605 121380681 hybridization