Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3844 ATGGAGTTGGAATATATGGCGAGTATAAATAGGGTGGTGGAGGAATCAAAATTGGAAAAGTTGAAGTATTTAGACATGTTCATCAAGGAAACCTTGAGAATCCATCCAGTGTCACCATTACTGGGTCATAATAAATGCATGGAAAATTATGAGACCCTAGAATTTGGACTGAGCCGGAGGAATTCTGGCCAGAAAGATCTGAGGGAAGATAGACTGATGTTAGAGGGAGAGACTTCAGACTTCCAACTGATACCGTTTGGGTTTGGCAGAAGAGGATGTCCTGGACTGCAGTTAGCCCGAACTGTGGTTTGGTTAGTGTTGGCACAGCTTGTGCATTGCTTTGATTGGAAGTTAAAAACAACTTCTTGCCAAGTGAATTGA 381 0.4226 MELEYMASINRVVEESKLEKLKYLDMFIKETLRIHPVSPLLGHNKCMENYETLEFGLSRRNSGQKDLREDRLMLEGETSDFQLIPFGFGRRGCPGLQLARTVVWLVLAQLVHCFDWKLKTTSCQVN* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3844 126 PRINTS E-class P450 group I signature 25 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 PRINTS E-class P450 group I signature 83 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 PRINTS E-class P450 group I signature 93 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 SUPERFAMILY Cytochrome P450 8 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 PRINTS P450 superfamily signature 26 37 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 PRINTS P450 superfamily signature 84 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 PRINTS P450 superfamily signature 93 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 Gene3D Cytochrome P450 2 55 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 PANTHER STEROID 21-HYDROXYLASE-RELATED 2 59 - -
Amo13g3844 126 PANTHER STEROID 21-HYDROXYLASE-RELATED 79 121 - -
Amo13g3844 126 PANTHER CYTOCHROME 79 121 - -
Amo13g3844 126 PANTHER CYTOCHROME 2 59 - -
Amo13g3844 126 Gene3D Cytochrome P450 56 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 86 95 IPR017972 GO:0005506|GO:0016705
Amo13g3844 126 Pfam Cytochrome P450 77 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3844 126 Pfam Cytochrome P450 10 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3844 Amo-Chr13 129227184 129227625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3844 2 118 Monolignol Biosynthesis Gene Families AT4G36220 37.857 1.55e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3844 - K20562 vvi:100264547 112.079