Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3824 ATGATGGGTCCTTCTACCCTCTCTCTTGTTATGGTGCAACACTCTTCCACATCATCATCAGGTGGTTGCACAAAGAGAAAACAGAACGTGCAGCTGAGAAATCCTTTTGCTTCAGTTAGCATGGGAGAGGAGAAGCCATTTGATTTCTTACGCACTTTATTTGAGGGCGTTATAGCAGGAGGTACAGCCGGAGTCGTAGTTGAAACAGCTTTATACCCAATTGACACTATAAAAACACGTTTGCAGGCCGCTCGGGGAGGAGAAAAACTAATACTGAAGGGACTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCAGCTTTATTTGTTGGAGTTTATGAGCCTATGAAGCAGAAACTGTTGAGGATGTTTCCTGAAAACCTGAGTGCTTTTGCTCATCTGACTGCAGGTGCCATAGGGGGCATTGCTGCTTCACTGATTCGCGTTCCAACAGAGGTTGTTAAGCAACGAATGCAAACTGGACAGTTTACTTCAGCTGCTGGTGCTGTCCGCTTTATTGCTGCTAAGGAAGGTTTTAAAGGACTTTATGCTGGGTATGGATCTTTTTTATTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGATTAGGATGGGTTATATGGCTGCGGCCCGAAGAAATTTGAATGATCCAGAAAATGCAATTATTGGTGCATTTGCAGGTGCACTAACTGGAGCTATAACAACTCCCCTTGATGTCATCAAGACAAGATTAATGGTTCAGGGATCTACAAACCAATATAATGGAATCGTAGATTGTGTTCAAACAATTATCAAGGAAGAAGGACCTAGTGCACTTTTGAAGGGTGTTGGGCCTCGAGTACTGTGGATAGGGATCGGTGGTTCGATATTCTTTGGTGTTCTTGAGGGTACAAAACGTTTTCTGGCTGAGAGGCGTCCTACACCTTCAGAGTCTCAGCCAGAAAAGGTTGAATAA 981 0.4414 MMGPSTLSLVMVQHSSTSSSGGCTKRKQNVQLRNPFASVSMGEEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPMKQKLLRMFPENLSAFAHLTAGAIGGIAASLIRVPTEVVKQRMQTGQFTSAAGAVRFIAAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQIRMGYMAAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSTNQYNGIVDCVQTIIKEEGPSALLKGVGPRVLWIGIGGSIFFGVLEGTKRFLAERRPTPSESQPEKVE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3824 326 Pfam Mitochondrial carrier protein 227 312 IPR018108 -
Amo13g3824 326 Pfam Mitochondrial carrier protein 132 215 IPR018108 -
Amo13g3824 326 Pfam Mitochondrial carrier protein 53 87 IPR018108 -
Amo13g3824 326 Gene3D Mitochondrial carrier domain 51 321 IPR023395 -
Amo13g3824 326 SUPERFAMILY Mitochondrial carrier 54 304 IPR023395 -
Amo13g3824 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 214 IPR018108 -
Amo13g3824 326 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 8 320 - -
Amo13g3824 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 309 IPR018108 -
Amo13g3824 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 51 123 IPR018108 -
Amo13g3824 326 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 8 320 - -
Amo13g3824 326 PRINTS Mitochondrial carrier protein signature 69 83 IPR002067 GO:0055085
Amo13g3824 326 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Amo13g3824 326 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Amo13g3824 326 PRINTS Mitochondrial carrier protein signature 56 69 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3824 Amo-Chr13 128635366 128640962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3824 130 315 Chloroplast and Mitochondria Gene Families AT1G07030 29.843 4.43e-16 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3824 13 128635366 128640962 Amo03g2887 03 120189763 120204834 hybridization