Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3788 GAACATGTAGCTACTTTTCATGACCATGACGATGCCGAATTGCCAAATCGCTTTCTTCAGTTGACTACCTCAAATCTTTCGCAGCATCGAGTACTTGATTCATTTCCCGAGATAAATCCCTCTCTCCAGATCCAATATCTCAACTTCTCTAGAGTTTACATGATCGGGAAGTTTAAGGATAAGTCTAATAAGGGTAATTCTATAAAGAAGTTTGTGGTAATTGTGAATGCCATCTATTTCATAGTAGTTACTCTAAGTACAATAGGATATGGGAATATTACCCCTAGTTCTAAATCTGGTAAAATCGGAACTATGGTTTTAGCTCTTTTCTACCTGAAATACATTCTTAGAAAATTAGAAACGTGCTTAGTTAAAAAATTAGAAGGAGGCATGTTAGATTGTTTGGTAGTTAACCATAAAATAGTTTATTGGGCAAAATTTTTCTTAGCGGTTCTTGCTGGCCCGTTTGTCTTTAGCATCGGAGCAGTCATAGTCCATCGTTCAGAGCGAATGAGTTGGTTAGATAGTTTTTACTTTTCTGTGATTTCCATAACAACAGTAGGTTATGGGGATTACTCTTTTAGAACACCAGTAGGAAATTTTGCAATTTTATTTCTGATTATTTGTATTCTTAGGCCAATTACTCCTCAAAACGAATGA 660 0.3561 EHVATFHDHDDAELPNRFLQLTTSNLSQHRVLDSFPEINPSLQIQYLNFSRVYMIGKFKDKSNKGNSIKKFVVIVNAIYFIVVTLSTIGYGNITPSSKSGKIGTMVLALFYLKYILRKLETCLVKKLEGGMLDCLVVNHKIVYWAKFFLAVLAGPFVFSIGAVIVHRSERMSWLDSFYFSVISITTVGYGDYSFRTPVGNFAILFLIICILRPITPQNE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3788 219 Pfam Ion channel 73 114 IPR013099 -
Amo13g3788 219 Pfam Ion channel 156 208 IPR013099 -
Amo13g3788 219 Gene3D - 41 119 - -
Amo13g3788 219 SUPERFAMILY Voltage-gated potassium channels 70 114 - -
Amo13g3788 219 SUPERFAMILY Voltage-gated potassium channels 122 209 - -
Amo13g3788 219 PRINTS Two pore domain K+ channel signature 83 111 IPR003280 GO:0005267|GO:0016020|GO:0071805
Amo13g3788 219 PRINTS Two pore domain K+ channel signature 185 194 IPR003280 GO:0005267|GO:0016020|GO:0071805
Amo13g3788 219 Gene3D - 155 212 - -
Amo13g3788 219 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 60 210 IPR003280 GO:0005267|GO:0016020|GO:0071805
Amo13g3788 219 PANTHER OS01G0696100 PROTEIN 60 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3788 Amo-Chr13 127519312 127521297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3788 75 208 Ion Channels AT1G02510 39.333 2.67e-23 93.2