Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3772 ATGTGTGAGCCGTATATTTCATTACCTGCCATGAATGTGATGGCTTGTGAGCAATTTGATTACTCATTCAGCCCTCCCCCCATGAACAAATTACTCCATGAATATATCTTACAAGATGCTTTTCCAAGCCAATCAGATGATCACTTATTATCTTCTCCAAACATCATCTATGATGATGTGTTTGATGAAATGCTTGAGCAAGAGGCCCTGAATGGATTCCTCCATCCAGAAAACCCACAGCAGCCAGACTTTGATTTCATTGGCCATAATGTTACAATGGCTGTTGAGTCCGAACTGTGCCAAGAAAACATCCCTATAGCCCAAGAAGAGGAGATGCATGTCTCAAATGAAGAAGGAGATGCATATTTGATGGGAATTCAAGCAGAGCTAATGGGAGAAACTAGTTTGGGAGATCTATTGCTATTAGGAGCTGAAGCTGTTGAAGCACAGAACTTTGTTCTTGCTCTGGACATAATAGAGAGAATTAACAACAATGCATCATCATCATCTTTTTTGGAAAATGGTGATTCTTTATTGAACAGGTTGGCTCTATTCTTTGCTCGGGGTCTGTATTATAAGAGTATAAATGCTCCTCAAGTGCAGTCTGATCCTGTTTCAACACACAACAATGCCTTCGGTGTGTTTCAGATACTCCAGGAACTCTCTCCCTATGTAAAATTCGCTCACTTCACTGCTAATCAAGCCATCTTTGAAGCCACAGAAGGTTCTGAGGATGTTCATGTCATTGATTTTGACATCATGGAGGGGATCCAGTGGCCACCATTGATGATGGACCTTGCAATGAGGAAGAACACTTGTCTTAGAGTAACAGCTGTTGTTGCAGATCAGCAAAGTGTAGCATATGTCCAGCAAACAGGAAGAAGGCTAAAAGAGTTTGCAGATTCTATTGATTTTCCTTTCGCTTTTGATCAGATAGTGATGGTTGGGGAGGAAGATCTTCAAAGAGTTGAACTTGGTCATACAGTTATAGTCAACTGTATGATACACCAATGGATGCCGAACAGAAGCTTCCCATTGATCAAAACATTCCTTGATGGTGTAAGCAAGTTATCACCAAGGCTTGTTGTTTTGGTGGAGGAAGAACTTTTCAACTTTGCTAGGCTAAAATCCATGTCGTTTGTGGAGTTCTTCTGTGAGGCTTTGCACCACTACACTGCACTTAGTGATTCACTTGCTAGTAGTTTGTTGGGTAGGCAGAAGATGGAGCTAACCATGATAGAGAAAGAAGTTATGGGGCAAAGGATTTTGGACAGTGTGAAGCAGTTTCCATGTGAGAGAGAAGAAAGAATGGTGTGGGAAGAAGGGTTTTACTCCTTGAAGAGGTTCAAGCGTGTTGCTATGAGTAGCTGTAATGTTTCACAGGCTAAGTTCTTGGTGAGCTTGTTTGGTGGAGGCTATTGGGTGCAATCTCAGGACTCTAGGTTGGCTCTATGTTGGAAGTCAAGGCCTTTGACATCTGCTTCAACCTGGGTACCTGCAACTTATTGA 1509 0.4195 MCEPYISLPAMNVMACEQFDYSFSPPPMNKLLHEYILQDAFPSQSDDHLLSSPNIIYDDVFDEMLEQEALNGFLHPENPQQPDFDFIGHNVTMAVESELCQENIPIAQEEEMHVSNEEGDAYLMGIQAELMGETSLGDLLLLGAEAVEAQNFVLALDIIERINNNASSSSFLENGDSLLNRLALFFARGLYYKSINAPQVQSDPVSTHNNAFGVFQILQELSPYVKFAHFTANQAIFEATEGSEDVHVIDFDIMEGIQWPPLMMDLAMRKNTCLRVTAVVADQQSVAYVQQTGRRLKEFADSIDFPFAFDQIVMVGEEDLQRVELGHTVIVNCMIHQWMPNRSFPLIKTFLDGVSKLSPRLVVLVEEELFNFARLKSMSFVEFFCEALHHYTALSDSLASSLLGRQKMELTMIEKEVMGQRILDSVKQFPCEREERMVWEEGFYSLKRFKRVAMSSCNVSQAKFLVSLFGGGYWVQSQDSRLALCWKSRPLTSASTWVPATY* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3772 502 ProSiteProfiles GRAS family profile. 127 498 IPR005202 -
Amo13g3772 502 Pfam GRAS domain family 138 497 IPR005202 -
Amo13g3772 502 PANTHER OS12G0162700 PROTEIN 15 498 - -
Amo13g3772 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 498 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3772 Amo-Chr13 127191340 127192848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3772 218 497 GRAS Transcription Factor Family AT1G55580 37.217 1.06e-44 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo13g3772 GRAS 1.3e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3772 - - gmx:100804613 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3772 13 127191340 127192848 Amo13g3772 13 127191340 127192848 ECH