Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3741 ATGGATGCAAAGCTCCATCCAAACTCTGAGGAGTCCGGTAGTTCCTTTGACAACTCGAATTCGGTGTGGTTGTCTTCCGGTACAAGCCAACATGTGACAGGGTCACAGCAGCTTATCTTCATCATATGCAGAATGGAAAGTGTTGGTGATCACCCTGCTCTTGCCATTAGCACCGACATTCGGACTATTTTCACGGCCTCGAGTGCTGTTGCTTTGCAAAAGGCCCTTGCAGTTCTGAAGGTTTCCCTTCTTAACCCCATTTTAGTTCATTGCAAGACTTCTGGGAAACCCTATGCAATTGTTCATCGTGTTACCGATAGTTTGATCATTGATTTTGAGCCTGTTAAGCCTCATGAAGTTTCCATGACTCGGCCAGAGTGCCCAATCTTACAAGCTTGCAGCAAAAGCCTTGAGCCATATCTGGATTTGCACTATCCAACCACTGATATTCTCCAAGTTGTGGTCAATGATAATGAAGATGGGGATGGATCTGACAGGCCTAATATAATGGATCTTGTGAGATGTGATGGAGCAGCACTCTTGTATAGAGACAAGGTATGGAGATTAGGTGTGGCTCCAAGTGAATCTCACATAAGAGAGTTAGCTTTATGGCCCTCTAAGTGCCATAAGGACTCCACAGGTTTGAGTACAGATAGCTTGTCTAATGCAGGCTTCTTAGGAGCTGCTGCTCTTGGTGACATTGTTTGTGGAATGGCAGTTGTGAGAATTTCTTCCATGGTCGTAGTTTTCTGGTTTAGATCACACACTGCTGCAGAAATCAGATGGGGTGGTGCAAAGTATGAACCTGGTGAAAGSGATGATCCTACAAAGATGAGTCCAAGATCATCATACAAGGCTTTCCTTGAAGTTGTGAAGGGAAGGAGCTTACCATGGAAGGACTATGAATAA 909 0.4466 MDAKLHPNSEESGSSFDNSNSVWLSSGTSQHVTGSQQLIFIICRMESVGDHPALAISTDIRTIFTASSAVALQKALAVLKVSLLNPILVHCKTSGKPYAIVHRVTDSLIIDFEPVKPHEVSMTRPECPILQACSKSLEPYLDLHYPTTDILQVVVNDNEDGDGSDRPNIMDLVRCDGAALLYRDKVWRLGVAPSESHIRELALWPSKCHKDSTGLSTDSLSNAGFLGAAALGDIVCGMAVVRISSMVVVFWFRSHTAAEIRWGGAKYEPGEXDDPTKMSPRSSYKAFLEVVKGRSLPWKDYE* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3741 302 PANTHER TWO-COMPONENT HISTIDINE KINASE 45 123 - -
Amo13g3741 302 Gene3D - 156 302 IPR043150 -
Amo13g3741 302 SUPERFAMILY GAF domain-like 161 302 - -
Amo13g3741 302 Gene3D PAS domain 44 140 - -
Amo13g3741 302 Pfam Phytochrome region 165 302 IPR013515 GO:0006355|GO:0009584
Amo13g3741 302 Pfam PAS fold 53 115 IPR013654 GO:0006355
Amo13g3741 302 PANTHER PHYTOCHROME A 155 302 - -
Amo13g3741 302 PANTHER TWO-COMPONENT HISTIDINE KINASE 155 302 - -
Amo13g3741 302 PANTHER PHYTOCHROME A 45 123 - -
Amo13g3741 302 SUPERFAMILY PYP-like sensor domain (PAS domain) 48 117 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3741 Amo-Chr13 126456748 126458327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3741 148 302 Histidine Kinase Gene Family AT1G09570 63.871 2.98e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3741 K12120 - gmx:100791098 221.861