Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3726 ATGAAAATCACGTTCTCCTCGACGGCGTCTTCATTTTACAAAACACCCCATCCTTCATCGACGCCGCTTCTCACCGATTCGCTCCTAATCTTTCATCATCGGCGCCTTTCGCCCCTTCACCGCCATTCACGAAGCTCCATCACACCCCTTCCCCAATCTCTCTCTTTCAGTATCAATGCCGATGAATTTCGCTACCTTCTCCACGTTGTTTTCTGTCGCTGCTCGCTAAAGCTCGTCAGCGTCGTCGCCGCCGCTTTTACCTCTTCTTCTCGTCGCCGTAGTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGAAAAATCCTGATAAAGAAGAAGTTGAGAAAATTACACAACCATATTTAGATGCTCTTGGTGAAGACTATTCTGTTTGTTGCCAAGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTAGTTCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAAAAGAGGTTGCTTTAGAGCATATTAAGAGGACTCATGAGGCTGTAAATGAGAAAAAGTCCAAACATATTTCTGCAGCAGTGTCACTAATCAGCAATGAGCAACATGGCATGGAGATCAATTCTGCTCGTGTTGCAACAGAGGAAGACGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATTGTAAGTGTATGAAGGGTAGTTGGTTTTCTGCAATAACGAGGGTTCTATAA 786 0.4453 MKITFSSTASSFYKTPHPSSTPLLTDSLLIFHHRRLSPLHRHSRSSITPLPQSLSFSINADEFRYLLHVVFCRCSLKLVSVVAAAFTSSSRRRSDLVVASPVEDYFLYIDDLKNPDKEEVEKITQPYLDALGEDYSVCCQGTAFFPLQSCMNHSCSSNAKAFKRDEDRDGQATIIAVRPIRKGKEVALEHIKRTHEAVNEKKSKHISAAVSLISNEQHGMEINSARVATEEDVAKNSKDLFEQFDCKCMKGSWFSAITRVL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3726 261 SUPERFAMILY SET domain 105 187 IPR046341 -
Amo13g3726 261 Pfam SET domain 133 186 IPR001214 GO:0005515
Amo13g3726 261 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 95 196 IPR044237 GO:0008168
Amo13g3726 261 Gene3D SET domain 52 189 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3726 Amo-Chr13 126088630 126091027 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo13g3726 SET 4.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3726 - - aip:107628408 303.908