Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3717 ATGAGCAAAGAAGAGAAGGAGGGAAGAAGAGAACCAAATGAGTTTGAGAATAATAAGAAAGTAAGAGTAGAAGAAGAAACACAGAGAGTAGGAAAAAAGCCTATTATTCAAATGAAGAAGATACAAGGTTGTGAGGTTGAGGCCATTGGCATCAACTACAAGATCCTCAAACATAAAACCGATCACCCTTTTAAAATCTTCAGTAAATCACCACAACAAGAATTGGAAGAAGCTGAAGAAGAAGAAGAAGATGCTGAAGAAGCAGAAGCAGAAAAAGCTTCCTCACAAAGGTGTTGCGGTGGAGGAGTAAGGCATGTTCTCAAGAATGTGAGTTTCAAAGCCAAGCCATGGGAAATCCTTGCAATTGTTGGGCCAAGTGGTGCTGGAAAATCATCACTGCTTGAGATTCTTGCAGGAAAAGTTACTCCACAGAGTGGTTCTGTGTTGCTGAATCACAAGCCTGTGGAGAAAGCTCAGTTCAGGAAGCTCTCAGGTTATGTAACACAGAAAGATACTTTGTTTCCATTACTTACAGTTGAAGAAACTATGATGTTCAGTGCAAAGCTAAGGCTAAGGCTCCCTCAGGAGCAGCTCCAATCTAGGGTCAAGTCACTGATCAAGGAGCTCGGACTTGATCATGTTGCCGGGGCGCGAATTGGTGATGAAAGGGTTCGAGGAATATCCGGTGGCGAAAGGCGCAGAGTTTCTATTGGTGTTGAAGTCATACATGATCCAAAGGTGTTGATTTTGGATGAACCAACTTCTGGTCTTGATAGTACTTCAGCATTGCAAATTATTGATATGCTTAAGGTGATGGCTGATACTAGGGGAAGAACCATAATCCTTAGTATCCATCAACCCGGATTCAGAATTGTGAAGTTGCTCAATTCATTGCTTTTGTTGGCAAATGGTTCTGTTTTACACCATGGCACTGCTGATTTGCTTAGTGTAAATATGAGGCTAATGGGTTTAGAGCTTCCCCTTCATGTCAATGTGGTTGAGTTTTCCATCGAGTCCATTGATGCCTTTCAGCAACAACAGATATGCAAGAGATTCCAGGTACAAACGCCAAGGCGATTGCAGGGGACGGTGCTGCCACAGAAGAAAGGTGATGATGAACAAGGTGAGTGTAGAAGTGGTAGGTTTACTTTACAACAGCTCTTTCAACAATCCAAGGTGATTGATGAAGAAGCTATCAATGCTGGAATGGATTTCACTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTATGATCCTCACTCATAGGTTCTCCAAGAACATCTTTCGTACAAAAGAGCTTTTTGCATGTAGGACTATTCAGATGCTGATTTCAGGGCTTGTTCTGGGATCCATCTTTTGTAATCTCAAGGATGATCTTGAGGGAGCAGAAGAAAGGGTTGGTCTATTTGCTTTCATTTTAACTTTTTTGCTATCAAGCACCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTGATGAAGGAGACATCTTGTGGAAGCTACAGAGTATCATCCTATGCTATTGCCAATGGCCTAGTTTACCTACCATTTCTTCTAATCCTAGCCATTTTGTTCTCAATTCCATTATACTGGCTTGTTGGTCTCAACAAGAATTTCATGGCATTTCTACACTTCCTGTTGCTGATATGGCTGATTCTATACACTGCAAATTCAGTTGTGGTCTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAGTCATTGCTGGTGTCATTGGATCATTCTTCTTGTTCTCTGGATACTTCATATCACAGCATGAGATTCCAAAATATTGGATTTTTATGCATTACATATCTCTTTTTAAGTATCCTTTTGAAGGGTTTCTAATAAACGAGTTCTCCAACTCAGGTAAATGCTTGGAGTACATGTTTGGTGGATGTGTGGTGAGTGGTGAAGATGTGCTCAAAGAAGAAGGTTATGGTGGGGAGAGTAATAGATGGAAAAATGTTGGGGTGATGATGGGCTTCATCTTGCTTTACAGGTTCATATCCTATGTGATTCTTAGATACAGATGCTCACAGAGGGGGTTCAGGAGTGTGGTCATCATCTAA 2088 0.4104 MSKEEKEGRREPNEFENNKKVRVEEETQRVGKKPIIQMKKIQGCEVEAIGINYKILKHKTDHPFKIFSKSPQQELEEAEEEEEDAEEAEAEKASSQRCCGGGVRHVLKNVSFKAKPWEILAIVGPSGAGKSSLLEILAGKVTPQSGSVLLNHKPVEKAQFRKLSGYVTQKDTLFPLLTVEETMMFSAKLRLRLPQEQLQSRVKSLIKELGLDHVAGARIGDERVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLLNSLLLLANGSVLHHGTADLLSVNMRLMGLELPLHVNVVEFSIESIDAFQQQQICKRFQVQTPRRLQGTVLPQKKGDDEQGECRSGRFTLQQLFQQSKVIDEEAINAGMDFTCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDLEGAEERVGLFAFILTFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSIPLYWLVGLNKNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISQHEIPKYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGGCVVSGEDVLKEEGYGGESNRWKNVGVMMGFILLYRFISYVILRYRCSQRGFRSVVII* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3717 695 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 328 IPR003439 GO:0005524
Amo13g3717 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 683 - -
Amo13g3717 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 39 683 - -
Amo13g3717 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 316 IPR027417 -
Amo13g3717 695 SMART AAA_5 116 334 IPR003593 -
Amo13g3717 695 Coils Coil 68 98 - -
Amo13g3717 695 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Amo13g3717 695 Pfam ABC transporter 107 255 IPR003439 GO:0005524
Amo13g3717 695 ProSitePatterns ABC transporters family signature. 227 241 IPR017871 GO:0005524
Amo13g3717 695 MobiDBLite consensus disorder prediction 75 89 - -
Amo13g3717 695 Gene3D - 69 326 IPR027417 -
Amo13g3717 695 MobiDBLite consensus disorder prediction 69 95 - -
Amo13g3717 695 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3717 Amo-Chr13 125651285 125653576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3717 105 333 Calmodulin-binding Proteins AT2G36910 25.620 3.99e-13 71.2