Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3664 ATGCGAGGAGCTGTGTATTGGGAACCCAACAAGCCTCTCACCATTGAAGAGTTCAACATGCCTCGACCCAAGGCCGGGGAGCTTCTCATCAAAACCAAGGCTTGTGGAGTTTGCCACTCTGATTTGCATGTTTTGAAAGGTGAAATCCCTTTCTCAAGTCCATGTGTTGTGGGTCATGAGATCACTGGTGAAGTTGTTGAACATGGACCTCTCTCMGACCCCAAAATTATTGAAAGGCTTCCACTTGGATCTCGAGTTGTTGGGTCCTTCATCATGCCTTGTGGCAACTGCTCCTATTGTTCAAAGGGCCATGARGATCTATGTGAAGATTTCTTTGCTTATAATCGTGCAAAAGGAACACTATATGATGGTGAAACTCGATTATTTCTTAGAGGCAGTGGAAAACCAGTATTTATGTATAGTATGGGAGGGCTTGCAGAGTACTGTGTTGTGCCAGCAAATGCTTTGTGTGTATTACCGAAAGCATTGCCATATAGCGAATCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTACGGTGCTATGGCTCATGCGGCTGAGGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCCTCAGATATAATTGCTGTGGATGTTCAGGATGAAAAGCTACAAAAAGCAAAGACATTTGGTGCTACTCACACTATAAATTCCACAAAGGAAGATCCCATCCAAAAGATCATTGAAATTACTGGTGGGAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGAAAACCTCAGACATTTGCCCAGTGCACACAGAGCGTGAAGGACGGAGGAAAAGCCGTGATGATTGGACTGGCACAAGCTGGTTCTGTGGGTGAGATGGATATAAACCGGCTTGTTCGTAGAAAGATACAAATTATAGGGTCGTATGGAGGGAGAGCCAGGCAAGATCTTCCAAAGTTAATGAGATTAGCAGAATCAGGAATATTCAATCTTGAGCATGCTGTTTCTAGAAGATACACCTTTGAGGAGGCAGCCAAAGCATTCCAAGATCTCAACCAAGGAAACATTGTTGGTAGAGCTGTCATAGATATAAACTAG 1119 0.4424 MRGAVYWEPNKPLTIEEFNMPRPKAGELLIKTKACGVCHSDLHVLKGEIPFSSPCVVGHEITGEVVEHGPLSDPKIIERLPLGSRVVGSFIMPCGNCSYCSKGHEDLCEDFFAYNRAKGTLYDGETRLFLRGSGKPVFMYSMGGLAEYCVVPANALCVLPKALPYSESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKTFGATHTINSTKEDPIQKIIEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSVGEMDINRLVRRKIQIIGSYGGRARQDLPKLMRLAESGIFNLEHAVSRRYTFEEAAKAFQDLNQGNIVGRAVIDIN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3664 372 Pfam Alcohol dehydrogenase GroES-like domain 26 157 IPR013154 -
Amo13g3664 372 SMART PKS_ER_names_mod 8 369 IPR020843 GO:0016491
Amo13g3664 372 Pfam Zinc-binding dehydrogenase 201 332 IPR013149 -
Amo13g3664 372 Gene3D - 178 315 - -
Amo13g3664 372 Gene3D - 5 361 - -
Amo13g3664 372 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 1 369 - -
Amo13g3664 372 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 1 369 - -
Amo13g3664 372 CDD Zn_ADH10 1 370 - -
Amo13g3664 372 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 58 72 IPR002328 GO:0008270|GO:0016491
Amo13g3664 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 336 IPR036291 -
Amo13g3664 372 SUPERFAMILY GroES-like 1 204 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3664 Amo-Chr13 124281151 124284997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3664 15 293 Monolignol Biosynthesis Gene Families AT4G37970 28.521 2.31e-19 85.9