Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3633 ATGGTGAGGATTTGTTTAATGTATGTCACAAGTGGAATATTTTTTATGGCTCATCTGGATAAGCGAAATAATCCAATCTATATGGATCTTTATGAATCTCACTATGTTAAAGATATTATTGGGATGTCTTTGTTAAAAGTTATCCATGATAAGTTAGGGTTAAACTACTTTGATGTATTGGATGATGTTGCTTCTGGTATAGAGGATAATGGGATGCATGAGAATATGAAAAATCCTGGTGTGCAAAGAATTGTCAAGAACAATTCAAAAGCAAGCACTGTCCAAAATAGATCAATGAAAAAAAAGAGAGGATATGTTGTTCTATATCATTGCAAGATATTAACTAATCATGATGTCAAGGCTGATCGAGTTTATATCCCGTATCAATTTGCTAAGTTACTGCTTGAGTCAGGAGGATCAGAAACTTGGAAGTCTGTTGTTGAGGAATCAAAGATTACTACAAGCTTTGAAATGAATGTTTTGAAGAGTAAAGGCAAAGAACGAGAATACAAAATTGGTCCTAAATGGAAAGATTTTGTAAAAATGCACAAACTTAAAACCAGAGATTCATGTGTGTTTGAGATGGTTTCGAAAGAGGATCAGCTGATTCGAAATTTCAAATCATCTCCTGTAGTTGTGCGCCATCAAACCCCTCCAGAGATTATGATGAAAATCTGTGGAGTTGGAGAGAGGCGCCAGGGAGGGAGCAGGAGCGTGCTCAGCACTTGGGTGGGCAAGTTGGATCTATCGATTGTCGTTGATAGAGGCGCCGAGGAGGAACGATCGAACAGCATGATCAGATCCAGTGGCAGATTATTCAGGAGGGAGTTGGAGCATGCTCAGCATCTGGGTGGTGAAAGTCGACTTATTGTTTGCCTTGATGAGGATGAATTCATTGATGTTGATTTAAAAGCAAGTGGCAAGCTACAACTGCTTAATTCGATGCTCATGGAGTTGAAGGCTAAAAACTTACGGGGATTAGGGGTTCGAATAGTGACAAGATATGAAAAAGCAAAAAGTTCAATGGTATCCATGGTGAAGTATCCAGATCCGCAGCGTTGTCGTCTTCATTTTTCTTTGCCTTTCTTGCTACAATCATCATCGCCTACCTCTATTGAGCTTCTCTTTCCCGTCGCCTCTGGATGTGTGCCTCTAACTACTTCTTCTACTTTGTTTGATTTGTACGAATACATTGGCGATGATGTTGATTGTGGAGATTAA 1221 0.3915 MVRICLMYVTSGIFFMAHLDKRNNPIYMDLYESHYVKDIIGMSLLKVIHDKLGLNYFDVLDDVASGIEDNGMHENMKNPGVQRIVKNNSKASTVQNRSMKKKRGYVVLYHCKILTNHDVKADRVYIPYQFAKLLLESGGSETWKSVVEESKITTSFEMNVLKSKGKEREYKIGPKWKDFVKMHKLKTRDSCVFEMVSKEDQLIRNFKSSPVVVRHQTPPEIMMKICGVGERRQGGSRSVLSTWVGKLDLSIVVDRGAEEERSNSMIRSSGRLFRRELEHAQHLGGESRLIVCLDEDEFIDVDLKASGKLQLLNSMLMELKAKNLRGLGVRIVTRYEKAKSSMVSMVKYPDPQRCRLHFSLPFLLQSSSPTSIELLFPVASGCVPLTTSSTLFDLYEYIGDDVDCGD* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3633 406 Pfam B3 DNA binding domain 112 201 IPR003340 GO:0003677
Amo13g3633 406 CDD B3_DNA 111 203 IPR003340 GO:0003677
Amo13g3633 406 Gene3D - 85 207 IPR015300 -
Amo13g3633 406 ProSiteProfiles B3 DNA-binding domain profile. 109 209 IPR003340 GO:0003677
Amo13g3633 406 SUPERFAMILY DNA-binding pseudobarrel domain 109 200 IPR015300 -
Amo13g3633 406 SMART B3_2 110 209 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3633 Amo-Chr13 123422303 123425776 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Amo13g3633 B3 3.4e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3633 - K11643 adu:110279727 324.709