Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3593 ATGGTGGACTTGCTATCAAACAGTGATAAGCCTATTCTATCTGGATGCTCTGCTGGAGGATTGGCTGCTATATTGAACTGCGATCGCTTCAAATCCTTCCTACCAAATAGCGCCAGAGTGAAATGCGTGCCAGATGCCGGCTATTTTATCCATGTACCAGATGTCTCCAGAATAAAGCACATTGAAAATTTCTACAAAGGAGTTGTTGAAACTCATGGATCAGCAAAGTATTTGTCCAAGTCCTGCACTTCAAAATATGGTGCTGACCTATTCTTAGCTATTGGTAAGGTGAAACTTGAAAATACCATCTTTGGAATCTGA 321 0.4112 MVDLLSNSDKPILSGCSAGGLAAILNCDRFKSFLPNSARVKCVPDAGYFIHVPDVSRIKHIENFYKGVVETHGSAKYLSKSCTSKYGADLFLAIGKVKLENTIFGI* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3593 106 PANTHER NOTUM-RELATED 5 90 IPR004963 GO:0016787
Amo13g3593 106 PANTHER PECTIN ACETYLESTERASE 7 5 90 - -
Amo13g3593 106 Pfam Pectinacetylesterase 5 87 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3593 Amo-Chr13 122289423 122290551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3593 1 90 Carbohydrate Esterase AT5G45280 58.889 2.62e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3593 K19882 - egr:104444195 114.005