Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3591 ATGGCTACGGTGCTGCACTGCTTCTCGGTGATGACGACCCTCAGCGACGACGACACCACCAGTGGCTGCGAAGTTCGACGGTGCTTCTCTGTTCTATTTTCCCGGGCTGCTGTCCCCGATTTTTCTTCTCTCTCACCATCAGTCATATTTTTCCTCTTTTCATTTCTTCGTAGTTTAGATTCTTCCAGTATTTTTCGTATGCGAAGGGAAGAAGTAGTGCGTGTCTTCACTAGCGTTCCCATTGTGAAATGGCATGATCTGTTCTCTCTTGAGACCACAGTTGGGGTTTATATTATCATAAGGGGTTTCATTGACGAGCAGCACACCATTGATAATGGGAGTGTTGTTCCTAAAAATGTATCCTCAATTGATCCTGAGATCTTTTCTGCTGCTCAACAAAAATCTATCTTGTCTTCTTCGAAACCTTTAAAGGAAGGATTTGGAGCTCATGGGAAGCCACATGCTGAAGGTGAATGGCATGATTCTAACGCTACATGTGGGGTTAATGCCGCTCAAGGTAGTGGCAATGTTAGACGTGTTACCAGGTATCATAACATGAAAGTCTGTCAGCAGAAGCAGCCAGCTTCTGGAATTACTCTAAAACATCCAGAGGAACTGAACAGTCCACTAACACCAGCTCAGTTGCAATCTCTGGAAAAAGTAACTACAAAAAAAGTAAATACACCATCTAAACATCTTGATGAAAGCTCTACATCTAGAGTTTCTAGAACTTTATTTGAAAATAAAGAAGGTTGTTCTAGGAGAAAGAAAGTTACAAGTGAAAAAATTCAGATCACAGTAGATATCCCCACCGTCTACTCTATCAAGTTTCAAAAAGTCCAGATCAGGGAAAAAGTAGTACGTGTCTTCACCAGTGCTCCAATTGCAAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAAGGGTTTCATTGACGAGCAGCGCATCATTGATAATGGTTTCCCTCATGAGGTCTTCAGTCATTTCTTATTTGGTTTTCCTCAAAATTGGGAAAGCTATGCAGCAGATTTGATTAAGGATGAACCAACTATTGGCACTGATTTGGGTAGTGCTGTTCCTAAAAATCCAGCTTCTGGAATTACTCTGAAACATCCAGAGGAACTGAACAATCCAGTGACACCAGCTCAGTTGCAATCTCTGGAAAAAGTGACTATAGAAAAAGTAAATACATTATCTGAGCATCTCGATGAAAGCTCTACATCTAGAGTTTCTATAACTTTATTTGAAAATAAAGAAAGTTATTCTAGGAGAAAGAAAGCTACAAGTGAAAAAAGTCATATCACGTGTGAAAGAAAAAGGACTAGATCTGCCACAACAACCAAATATCCACGAAAAAGGGGTTTAAGCCCCTCGATCATTGGATGGTTGCTTCCACCACCCTTAGAGTTTTGGCGTAACCAGATACCGATTTACAATGCGGTATGTGATATCTTTGGTTGA 1482 0.4076 MATVLHCFSVMTTLSDDDTTSGCEVRRCFSVLFSRAAVPDFSSLSPSVIFFLFSFLRSLDSSSIFRMRREEVVRVFTSVPIVKWHDLFSLETTVGVYIIIRGFIDEQHTIDNGSVVPKNVSSIDPEIFSAAQQKSILSSSKPLKEGFGAHGKPHAEGEWHDSNATCGVNAAQGSGNVRRVTRYHNMKVCQQKQPASGITLKHPEELNSPLTPAQLQSLEKVTTKKVNTPSKHLDESSTSRVSRTLFENKEGCSRRKKVTSEKIQITVDIPTVYSIKFQKVQIREKVVRVFTSAPIAKRHDLFSLETTDGVYIIIKGFIDEQRIIDNGFPHEVFSHFLFGFPQNWESYAADLIKDEPTIGTDLGSAVPKNPASGITLKHPEELNNPVTPAQLQSLEKVTIEKVNTLSEHLDESSTSRVSITLFENKESYSRRKKATSEKSHITCERKRTRSATTTKYPRKRGLSPSIIGWLLPPPLEFWRNQIPIYNAVCDIFG* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3591 493 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 285 451 - -
Amo13g3591 493 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 68 113 - -
Amo13g3591 493 Pfam SANTA (SANT Associated) 70 113 IPR015216 -
Amo13g3591 493 Pfam SANTA (SANT Associated) 283 347 IPR015216 -
Amo13g3591 493 MobiDBLite consensus disorder prediction 432 457 - -
Amo13g3591 493 MobiDBLite consensus disorder prediction 432 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3591 Amo-Chr13 122160558 122174629 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo13g3591 SANTA 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3591 - - adu:107480063 270.781