Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3589 ATGGCTGAGCTTACTTCAACTCCATCCAATTCTAAAAACGCCAATTTATCTTGTTTCCAACCAACGGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACATGGATTCGAAGGAAAGCAGTTAGCCATTGGAGGCATTGCATCAAAAAGGGAAGAAGTAGTGCGTGTCTTCACCAGTGCTCCCATTGCGAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAGGGGTTTCATTGACGAGCAGCGCACCATTGATAATGGTTTCCCTCCTGAGGTTTTCAGTCATTTCTTATTTGGTTTTCCTCAAAACTGGGAAAGCTATGCAGCAGATTTGATTAGGGATGAATCAACTATTGGCACTGATTTGGGTAGTGCTTTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCTGCTCAAGAAAAATCTATCCTGTCTTCTTCGAAACCTTTAA 483 0.412 MAELTSTPSNSKNANLSCFQPTVCLYEWWLVKAKHGFEGKQLAIGGIASKREEVVRVFTSAPIAKRHDLFSLETTDGVYIIIRGFIDEQRTIDNGFPPEVFSHFLFGFPQNWESYAADLIRDESTIGTDLGSAFLKMYHQLILRSSLLLKKNLSCLLRNL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3589 160 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Amo13g3589 160 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 127 - -
Amo13g3589 160 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3589 Amo-Chr13 122137154 122143107 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo13g3589 SANTA 8.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3589 - - aip:110269509 203.371