Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3586 ATGGCTCCCTCTGACCAACCTCGCTACTCTCTTATCCCTTCTTTCCTTTACTCACCAAAAACATTGCTCAACAATGTGTCCTCACATTCTTCTTCTTCATCATCATCACCACCACCATTCTCAGGCTCAGAGGGTAGGAATAGTAATAATAATTTTATGATCCCTGCACCAAAAGAGAGTATTCCATTGTATTCTCCTGCTTACTACGCCGCATGCAGCTTTGGTGGCGTCTTCAGCTGTGGTCTCACTCACATGACCGTCACTCCTCTCGATCTCGTCAAGTGCAACATGCAGATTGACCCAGTAAAGTACAAGAACATATCATCAGGATTCGGAGTTCTGATGAAGGAGCAAGGAATGAGAGGGTTCTTCAGGGGTTGGGTCCCAACACTGCTTGGGTACAGTGCTCAGGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAGAAATACTACTCAGATCTTGCAGGCCCAGAGAATGCAGCCAAGTACAAAACCTTCATATTTCTAGCAGGATCAGCCTCTGCTGAAGTCATTGCTGATATTGCACTGTGCCCCATGGAGGCTGTCAAAGTTCGTGTGCAAACCCAACCTGGCTTTGCGAGAGGTTGTATAAAGGACTTGTTCCACTCTGGGGCCGCCAGATTCCATACTGTTGTGGAGATGCTGTACAAGAATGTCGTCCCAACACCGAAAGATCAGTGCAGCAAAGGATTGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATTGCTGGCGTGCTCTGTGCTATTGTCTCACACCCTGCAGACAATCTTGTTTCCTTCCTGAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATAGGGCTAGTTGGTCTTTTCACACGTGGACTTCCTCTTCGTATAGTTATGATTGGAACACTAACAGGAGCTCAGTGGGGACTCTATGATTCCTTCAAAGTATTTGTAGGGCTGCCTACCTCTGGTGGAGGTGCACCTAAAGCTGCCAAGTAG 1002 0.4721 MAPSDQPRYSLIPSFLYSPKTLLNNVSSHSSSSSSSPPPFSGSEGRNSNNNFMIPAPKESIPLYSPAYYAACSFGGVFSCGLTHMTVTPLDLVKCNMQIDPVKYKNISSGFGVLMKEQGMRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAAKYKTFIFLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGCIKDLFHSGAARFHTVVEMLYKNVVPTPKDQCSKGLQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGGAPKAAK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3586 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 318 IPR018108 -
Amo13g3586 333 PANTHER PHOSPHATE CARRIER PROTEIN 214 332 - -
Amo13g3586 333 PANTHER PHOSPHATE CARRIER PROTEIN 1 205 - -
Amo13g3586 333 SUPERFAMILY Mitochondrial carrier 68 313 IPR023395 -
Amo13g3586 333 Gene3D Mitochondrial carrier domain 47 228 IPR023395 -
Amo13g3586 333 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 214 332 IPR044677 GO:0005315|GO:1990547
Amo13g3586 333 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 205 IPR044677 GO:0005315|GO:1990547
Amo13g3586 333 MobiDBLite consensus disorder prediction 25 51 - -
Amo13g3586 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Amo13g3586 333 Pfam Mitochondrial carrier protein 69 153 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3586 Amo-Chr13 121946652 121948797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3586 5 332 Chloroplast and Mitochondria Gene Families AT5G14040 67.486 1.50e-169 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3586 K15102 - gmx:100800530 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3586 13 121946652 121948797 Amo03g2608 03 113572131 113574201 hybridization