Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3576 ATGAAAGTAACAGAATCCGAAGCGGAGGCGGAGGGGGTGACCGTAAGGGAGTGCATTGAAGTGATGTCAAGCCTCCTGAGCGAAATCCCATCCATGGAGAGCTTCAAGGGAAAGTGGTCACTCATCGGAGCCACACTGACACACCTCCAAACCCACCTCTCCGACTCCGATTTCCCCGCCTCAAACCCACTATCCCTCGACCTCCTCCGCTCTCTCTCGCAAACGCTCCACCACGCTCTCTCCCTCGCCCAACACTGCCACTCCCCCAACCCCCCTCACGGCAAGCTCAAGACACAGAGCGACCTCCACTCCCTCCTCGACACCCTCAACCGCCACCTCCACGACTCCACCATCCTCTCCCGCACCCATATCGACAACGCCGCCGCCCTCTCCACCAACCCCCGCGACTCTCTCAGATCCCAATCCAGGAACCTCATCACCCGCCTCCAAATCGGCTCACCCGACTCTCGAAACTCCGCCATGGACTCCCTGCTTTCTCTTCTCCATCAGGACGACAAGAACGTCGTCATCGCCGTCGCGCAGGGCGTGGTCCCGGTACTCGTGCGCACACTGGATCACTCCACCTCCTCTGAGTCCAAGGAAAAAGCCGTTGCCGCCATCGCCAGAATCTCAACCGTCGACACCAGCAAGCCCGTCCTCGCTGCCGAGGGCTTGCTTCTCCTCAACCATCTCCTCCGGGTCCTCGATTCCGGAAGCGGGTTCGCGAAGGAGAAAGCCTGCATAGCGCTTCAGGCGCTGAGTTACTCGAAGGAGAACGCCAGGGCCATAGGCTCACGCGGCGGAATCTCGTCGCTCTTGGAGATCTGCCAAGCTGGCACCCCCGGTTCTCAAGCCTCCGCCGCCGGCGTTCTCAGGAATTTATCGCGCTTCGCCGAGATCAAGGAGAATCTCGTAGAAGAAAACGCTGTTTTCGTCCTCTTGGGTCTCGCTTCTTCCGGAACTGCGTTGGCGCAAGAGAATGCCATCGCCTGCCTCTGTGGTTTAGTCTCTGAGGACCAAAGCTTGAAGCTTTCGGTGGTTAGGGAAGGTGCGCTGGAGAGCTTGAAGAATTTCTGGGAGTCGGGTCGGAGCCCCGATGTAGCAATTGAATTTCTGGGTCAGCTGGCTTCGTGTTCGCGCGTGGCGGACGTTGTTGTCTCCGATGGGTTTGTTGTGCCGCGTGTGGTGGCTGCATTGGGGTCCGGAGTTATGGCGGTTAGAGTTGCGGCAGGTAAAGCCGTATATGCTATGTGTTTGGAGAGCGCAAGAGCGAGGAAGGAGTTGGGTGAGTGCGGCGGCGTTAGCCCTCTGATAAAGATGCTGGTGGATGGGAAGAGCACGGAGGAGAAGGAGGCGGGTGCGAAAGCATTGTCGGTGATGCTGATGCATGCAGGGAATCGGAGAGTGTTTCGGAAGGACGAGAGAGGGATAGTGAGTGCGGTTCAGCTGTTGAACCCTTCGGTGGTGGGTTTGGATAAGAGGTACCCGGTGTCGTTGCTGGAGTCGCTGGTTCATTCCAAGAAGTGTAAGAAGCAGATGGTTGCTGCTGGTGCTTGTGTTTACACTCAGAAGCTTGTGGACATGGATGTCCCTGGTTCCAAGAAGCTCTTGGAAAGCCTTGGTCGTGCCAAGATTTGGGGTGTTTTTGCTAGACCCTAA 1659 0.5763 MKVTESEAEAEGVTVRECIEVMSSLLSEIPSMESFKGKWSLIGATLTHLQTHLSDSDFPASNPLSLDLLRSLSQTLHHALSLAQHCHSPNPPHGKLKTQSDLHSLLDTLNRHLHDSTILSRTHIDNAAALSTNPRDSLRSQSRNLITRLQIGSPDSRNSAMDSLLSLLHQDDKNVVIAVAQGVVPVLVRTLDHSTSSESKEKAVAAIARISTVDTSKPVLAAEGLLLLNHLLRVLDSGSGFAKEKACIALQALSYSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSRFAEIKENLVEENAVFVLLGLASSGTALAQENAIACLCGLVSEDQSLKLSVVREGALESLKNFWESGRSPDVAIEFLGQLASCSRVADVVVSDGFVVPRVVAALGSGVMAVRVAAGKAVYAMCLESARARKELGECGGVSPLIKMLVDGKSTEEKEAGAKALSVMLMHAGNRRVFRKDERGIVSAVQLLNPSVVGLDKRYPVSLLESLVHSKKCKKQMVAAGACVYTQKLVDMDVPGSKKLLESLGRAKIWGVFARP* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3576 552 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 550 - -
Amo13g3576 552 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 550 - -
Amo13g3576 552 SUPERFAMILY ARM repeat 138 478 IPR016024 -
Amo13g3576 552 Gene3D - 132 366 IPR011989 -
Amo13g3576 552 Gene3D - 367 539 IPR011989 -
Amo13g3576 552 SMART arm_5 297 337 IPR000225 GO:0005515
Amo13g3576 552 SMART arm_5 421 462 IPR000225 GO:0005515
Amo13g3576 552 SMART arm_5 171 212 IPR000225 GO:0005515
Amo13g3576 552 SMART arm_5 256 296 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3576 Amo-Chr13 121522734 121524939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3576 138 410 U-box Gene Family AT2G23140 30.797 1.40e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3576 - - pvu:PHAVU_009G163700g 640.958