Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3565 ATGAACTTTGTGAAGAAGTGTAAGAGGGTGTGGGGAAGCAACGAGAGAATGTGTTGTGGTGAAGAAGAGAAGAGTGGCAGTTATGGGAGATTAAAAGAGGATAAGAAGAAGGAGAAGAGGAAGGTGAAGAAGGTGGAAACAAGTGCTCCTCCACATGGTTGTTTCTGTGTGTACGTAGGAGAAGAAAAGCAAAGGTTTGTGATGAAGATAAAGCACGCGAACCATCCATTGTTCAAGGCCTTATTGGACGCTGCTGAAACCGAATACGGTTACAGAAATGGACCACTCTGCCTCCCTTGCGAAGTTGACTTGTTCTGCGAGGCACTCGCTGAGATCCAGAACACTTCTTCTTCCGTCGGTTGTGCCTTTCATCACACTAACAAACACTACTCTTCTTCTTCATCTTCTTCTTCTTCTACTTCATCCGCATCGGTTTTCCAGAGTCCATTGTCCTATCATTCTAATCCCACTGATTACCAGCTTCTCGTATAG 492 0.4492 MNFVKKCKRVWGSNERMCCGEEEKSGSYGRLKEDKKKEKRKVKKVETSAPPHGCFCVYVGEEKQRFVMKIKHANHPLFKALLDAAETEYGYRNGPLCLPCEVDLFCEALAEIQNTSSSVGCAFHHTNKHYSSSSSSSSSTSSASVFQSPLSYHSNPTDYQLLV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3565 163 Pfam Auxin responsive protein 35 110 IPR003676 GO:0009733
Amo13g3565 163 Coils Coil 28 48 - -
Amo13g3565 163 PANTHER SMALL AUXIN-UP RNA-RELATED 1 134 - -
Amo13g3565 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 134 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3565 Amo-Chr13 121028253 121028980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3565 20 118 Calmodulin-binding Proteins AT4G34750 38.095 1.57e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3565 K14488 - cam:101489648 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3565 13 121028253 121028980 Amo03g2586 03 111979044 111979892 hybridization