Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3551 ATGGAGGAGAAACGCCGCGATGCTGCACCTCCAGCTACTCGTTTCGCCACCGCCGACTCAACCGCATCCGAGCCTACATCCACGCACCACTGTAGTGCATCAAATTCGCGTGGCGTCGCTACTGCTTCATCTTCCACGGCGGGTTCTGCCGCTGGTTCTACCTCTTCAGGAACTCCGGTTCTGATATCCGGAGAGTGTTCTAACTCGATTCCACCTTCTTCCTTCAATCTCCACAACCAAAATGGGCATGTCTACATAAGGAAGAAACATATGAATCAACCACAATTTGCACATCAATCCGGCTTTGCTTGTTCGAAACTATTGAGCATGAGGAGATGTCGGTCAATTTTTAATAATTTGACAGCATCAGTCATGAAGAAATTTGAAAGTGCAACAACTGGCTTAGAAGGAGATGTAGATGCATTCTGCACTTACATTATTAAAAGAAAACCAAAGATATGCACATATTCTGACAATTGTGAATTTGATATTGGCCATTTGAAGCGGTTCACCTTCCGTGAACTACAAATTGCTACTGGAAATTTCAGTCAAAAGAACATCCTTGGACAAGGAGGCTTTGGAATTGTCTACAAAGGATGCCTTACAAATAAAATGCTGGTGGCAGTGAAGAGGCTGAAAGATCACAATTACACTGGAGAAATGCAATTTCAAACTGAAGTTGAGATGATCGGCTTGGCTGTGCATCGTAACCTTTTGCGTCTCTATGGATTTTGTATGACTCCAGATGAAAGGTTACTTGTTTATCTCTACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGTAGTTGAAATAGAAAATATGTATCTGCAGATTTAA 840 0.4286 MEEKRRDAAPPATRFATADSTASEPTSTHHCSASNSRGVATASSSTAGSAAGSTSSGTPVLISGECSNSIPPSSFNLHNQNGHVYIRKKHMNQPQFAHQSGFACSKLLSMRRCRSIFNNLTASVMKKFESATTGLEGDVDAFCTYIIKRKPKICTYSDNCEFDIGHLKRFTFRELQIATGNFSQKNILGQGGFGIVYKGCLTNKMLVAVKRLKDHNYTGEMQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYLYMPNGSVADRLRVVEIENMYLQI* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3551 279 MobiDBLite consensus disorder prediction 1 57 - -
Amo13g3551 279 Pfam Protein kinase domain 183 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3551 279 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Amo13g3551 279 MobiDBLite consensus disorder prediction 16 57 - -
Amo13g3551 279 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 153 273 - -
Amo13g3551 279 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 153 273 - -
Amo13g3551 279 SUPERFAMILY Protein kinase-like (PK-like) 161 271 IPR011009 -
Amo13g3551 279 ProSiteProfiles Protein kinase domain profile. 182 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3551 279 Gene3D Phosphorylase Kinase; domain 1 154 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3551 Amo-Chr13 120621792 120625128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3551 159 268 Receptor kinase-like Gene Family AT5G45780 80.909 1.32e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo13g3551 Pkinase 1.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3551 - - aip:107630828 226.868