Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3533 ATGCACTGCTTTATCCAGGTGGGTATTCCTTCTGATCGTGAACAATATATACATCGTCTTGGAAGAACTGGACGGGAAGGCAAAGAAGGGGAAGGCATATTGTTGATTGCTCCATGGGAAGAATATTTTTTAGATGAAATCAAGGATCTTCCTCTAGAGAGATTCCCTTTTCCAGATATAGATCCACAGACAAAGCTTAAGATAGAACATTCCATGGGAAAGATAGACAGTGACGTCAAAGAAGCCGCGTATCATGCTTGGCTGGGTTATTACAACTCAATTAGGGAAATTGGGAGGGAGAAGTCCACCATAGCTGAGCTTGCAAACCGGTTTTCTGCATCAATTGGTTTACAGAAGCCTCCTGCGCTCTTTCGAAAGACTGCTTTAAAGATGGGTTTGAAAGACATTCCTGGCATTAGAATTCGTAGATAA 432 0.4213 MHCFIQVGIPSDREQYIHRLGRTGREGKEGEGILLIAPWEEYFLDEIKDLPLERFPFPDIDPQTKLKIEHSMGKIDSDVKEAAYHAWLGYYNSIREIGREKSTIAELANRFSASIGLQKPPALFRKTALKMGLKDIPGIRIRR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3533 143 Gene3D - 1 130 IPR027417 -
Amo13g3533 143 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 5 142 - -
Amo13g3533 143 PANTHER RNA HELICASE 5 142 - -
Amo13g3533 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 62 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3533 Amo-Chr13 119831489 119832591 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3533 - - lja:Lj4g3v2917670.1 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3533 13 119831489 119832591 Amo03g2518 03 110079985 110084020 hybridization