Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3513 ATGGTTGCATATATTGCTAATACATTAATTTTCATCTTAAGTGGAGTTGTTATAGCTGAAGGAGTACTTGGTGATGACAATGTCTTCCATCATGACTCGCTGCAAATTCTTGGTTCTATTGAAGGAACATCATGGACCCACCTCTTGCTTCTCTATGTTTATGTTCAAGTGTCAAGATGCATCGTAGTTGGTGCATTATTTCCCTTGCTAAGGTATTTTGGATATGGCTTGGATTGGAAAGAAGCTAGTATTTTAATCTGGTCAGGATTGCGAGGGGCAGTTGCCTTGTCACTTTCATTATCAGTCAAACGTTCGAGTGGCCGATCACTTGAATTGACTCTAGAGACAGGAACGCTGTTTGTTTTCTTCACTGGTGATATTGTGTTTTTAACACTTATAGTGAATGGTTCGACAACACAGTTCGTTTTACACTACCTTGACATGGACAAGTTAACAGCTGCAAAGAAGTCTTGTCTTTCGTGGAGATTCACCTTCCAAAGAAGCCTTAGGAATCAGAGCACAAGATCTATTATTGTACATGATTATGCCATTATTAACTATTAA 564 0.3865 MVAYIANTLIFILSGVVIAEGVLGDDNVFHHDSLQILGSIEGTSWTHLLLLYVYVQVSRCIVVGALFPLLRYFGYGLDWKEASILIWSGLRGAVALSLSLSVKRSSGRSLELTLETGTLFVFFTGDIVFLTLIVNGSTTQFVLHYLDMDKLTAAKKSCLSWRFTFQRSLRNQSTRSIIVHDYAIINY* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3513 187 PANTHER SODIUM/HYDROGEN EXCHANGER 1 161 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo13g3513 187 PANTHER - 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3513 Amo-Chr13 119306322 119309805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3513 1 161 Antiporters AT2G01980 67.081 6.76e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3513 - - aip:107630808 343.969