Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3511 ATGGAGCCTCAGCCTCTATGGTTTTGTTCGGTTTACTTAGTTGTTAAAATTTCTGAGTTAGGTGTGTTTGTAAATTCAGAAATTAGTATTGTGATTCTTTTTGAAAATTCAATGGAAGCATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCATAATATTAGTGATTATGTGGATGAAGACGCAACTTCTGATGCAGTGGATATGGATCAATATCGCATAAACTCTTGGAAAGATATTGGTAAGATTGATTTCTCAAGTCTATCTATGGAAAATATTTGTCAATTGCACTTTGTTGATCTTATCTTGGCATTCAAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTACGAAAGAGTAGAAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAGCATATGTTTGTTCTCGTGAAGGATATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCTAAAACCAGAGACAAAATGTGGTTGTATGAGTAAACTTCATGTTTTCTTCGATGTGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACACAACCATGAGCTTATTATTCCAAAATATGTTAAATCACACCATAATTTGACAGAATTTGTTCAACACTTCCAGCATTGTTTGAGCTACATGCAACACAGAAAGGATTTGGCAGACTTTAAATCATCAACTGGACAACCTGTGATACAGACGCACTTTCAAAAATTAGAAAGGTCATTAGCTACCATTTATACCCGGCAAATTTTTTATGTTGTTCCGTTCAATGCTCCACAAGGCCAGCACATTGAAGGTAATATATGA 831 0.3466 MEPQPLWFCSVYLVVKISELGVFVNSEISIVILFENSMEASNSQRHTSDQNVHNISDYVDEDATSDAVDMDQYRINSWKDIGKIDFSSLSMENICQLHFVDLILAFKFYNSYAKTRGFSVRKSRSRIVDGKVREKAYVCSREGYRLEKWNHMKNRVRELKPETKCGCMSKLHVFFDVVTESWVVRDFCDEHNHELIIPKYVKSHHNLTEFVQHFQHCLSYMQHRKDLADFKSSTGQPVIQTHFQKLERSLATIYTRQIFYVVPFNAPQGQHIEGNI* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3511 276 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 42 207 - -
Amo13g3511 276 Pfam FAR1 DNA-binding domain 107 196 IPR004330 -
Amo13g3511 276 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3511 Amo-Chr13 119284213 119286461 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g3511 FAR1 2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3511 - - aip:110269505 340.502