Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3471 ATGGAGAGAAGACCATCTCCTCTGGTTGACCAAACATGCACGTCGCGAATGTTCGGAATTTTTAATTTTCTTGGAGGTCATTTCAGCAGAAAATTGGTTTTCAGTGCGAGGCATTTGAGTAGAGATGGCACTGATGCAGGAAACACAAGCAACAGAAGTAGCTCAAGTGAGCTTAGTGCAGTTGATGAAATGTACCCTCACATTGGTGTAAATTCCAGAAGAAGAGATTATGGTTGTAAAAGTGTCAGTTGTGTGGAGAATGCTCAGATGGCGGCAGATCAAGGAAATAAAGTGACAAAGATGACTATTGATCCAAAATTTGTCAATAAAAACTATCTAAGCAAACAAGGTGCAGAATGTCAACCTGATCAACTCTTGGATGCTTTACAGATATTATACTCAAACAAAGAGCTTTTCCTAAAACTTCTACAAGATCCAAACTCTCTGCTGGTGAAACAGATAAGTGGCTTACAGAGTTCTCAAATGAATAAATATCAAAACAGTAATGGAAGAAAATCTGGAAAGCCAGTTAAATCTTCCTTTGATAGACATGATTCCGGTTCAAATATTGAGCTGGAACTTCGTGACAAAATAGTGGTTCTGAAACCTACCACAAATAAGGAGAAAAATTCTGCTGCCACTAGATTTGATAGTCCATGGCTGCATTCTCATCGAAGCTTGATTCATAATCCACAAAATGCAAAGTTTTCACATTTTCCACTTTGTCATATAAAGAGGAAGTTGAGATATGTCATGAGAGCAAGGCGAAAAGAACAGAAAACTGATGGAAAGCCTGAAAATGATCCCTGTGGTTGCAAGTTCTTGCAAGATGGCAAAATATTAAAAGAATTGAAAAGTGTGGGAAATTCACTTGAGACTTCCCCTTCAATTTATGAGAAAAGGTTCAAAGATTCTGAATTGTGCATAGGAGAGGAGGATGCCTCGGTTAGCGAAAGTTGCAATAGGATGACAGGTGATGCTTCAGTCAGCCCTTCGGAGCAAAATACACTGAACATGCCTGTTAAAGATAGGAAAAGTCTGTCTGTAAGGAGAAAGGAGCATCTTCCTAACTTTGAGTCCATATCAAGCTTGCAAAGGTACTACAATCATGGTTATATCACTGAAGGGATGAGATACTTGGACAACTATCAAATGGACCATAGAACCAAGTTGGGGCTTCAAAAAGAAAGGCAAAATGGTTGTTCCATTAGATTTTTGGGACATAAAAATGCACCAAGAGATACCATTAAGACATTTAGTGATAAGTTGAAGCCTTTTGGTACTGATATTAGAACCCAAGAGAGTCTTCCTGGAGGCGATCTACATGCACAGTCTGATAATCCTAGAGATGATGGATATAATGACAGTCCAACTCTCAACTTGGATAAAAGAAATTCAACCGGAGAAATTGAGCATTTTCAAGATTCACATCCAGAGATCCAAATTCTGTCCTTTCCACCCAAAGTTGTTTCATCAAGCCCATTTTCCACTGAAAGAATAGAAGAAAGGACTGAATCTGTTGTTGAGCATTCCACATTACAACCAGATGAATATCTGGTACAAGCAGTGCACGAACAAATCGAAGATAACCATTTTGCAGAACTTGTAAGATCCTCCTTAAATGGAACAAACAATCTAGCCTCCTCCAAGGACATGTTGGACTGCTCAAGGGAAATTGTTAAGGTTTTCGGCTTGAAATGGGATGAACTCGTGATGAAGTGCGAATCAGCCGATATGCATGATCCATCCACATTTGATGAACTGAAAGGATCGATGGGTCAACTTTCTTGCAATGCAATCTTGCTTGACTGTGTCATGCAAGCATTCATGGAAGTATATCAGAATTGTGGTTTCCCATTTAACATTGCAAGGAAAAATCCACACTTCCAAGCATATTTTGCAAAGAAAATTCTTGCTCAAGAGATTGCTGAAGTGATTAAATTGCATTTTGTGCCTCATCCATCACAAATAACATTAGACCAGCTGGTTGGAAAGGACTTAGAAAGAAGTGAATCTTGGCTAAATATCCAAGTTGATATAGAACATATTGTGAAAGAAGTGGAGGAAGATGTGCTTGAAGATTTGGTATTGGAAATGGTATCTGAGATGGACATCAGAGACTTGAAAACTTTGCATGAACATCAAACAAAGCATAAAGGAAAATAA 2166 0.3855 MERRPSPLVDQTCTSRMFGIFNFLGGHFSRKLVFSARHLSRDGTDAGNTSNRSSSSELSAVDEMYPHIGVNSRRRDYGCKSVSCVENAQMAADQGNKVTKMTIDPKFVNKNYLSKQGAECQPDQLLDALQILYSNKELFLKLLQDPNSLLVKQISGLQSSQMNKYQNSNGRKSGKPVKSSFDRHDSGSNIELELRDKIVVLKPTTNKEKNSAATRFDSPWLHSHRSLIHNPQNAKFSHFPLCHIKRKLRYVMRARRKEQKTDGKPENDPCGCKFLQDGKILKELKSVGNSLETSPSIYEKRFKDSELCIGEEDASVSESCNRMTGDASVSPSEQNTLNMPVKDRKSLSVRRKEHLPNFESISSLQRYYNHGYITEGMRYLDNYQMDHRTKLGLQKERQNGCSIRFLGHKNAPRDTIKTFSDKLKPFGTDIRTQESLPGGDLHAQSDNPRDDGYNDSPTLNLDKRNSTGEIEHFQDSHPEIQILSFPPKVVSSSPFSTERIEERTESVVEHSTLQPDEYLVQAVHEQIEDNHFAELVRSSLNGTNNLASSKDMLDCSREIVKVFGLKWDELVMKCESADMHDPSTFDELKGSMGQLSCNAILLDCVMQAFMEVYQNCGFPFNIARKNPHFQAYFAKKILAQEIAEVIKLHFVPHPSQITLDQLVGKDLERSESWLNIQVDIEHIVKEVEEDVLEDLVLEMVSEMDIRDLKTLHEHQTKHKGK* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3471 721 Pfam Protein of unknown function (DUF3741) 104 148 IPR022212 -
Amo13g3471 721 MobiDBLite consensus disorder prediction 161 175 - -
Amo13g3471 721 MobiDBLite consensus disorder prediction 161 185 - -
Amo13g3471 721 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 6 94 - -
Amo13g3471 721 MobiDBLite consensus disorder prediction 426 464 - -
Amo13g3471 721 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 95 703 - -
Amo13g3471 721 PANTHER DUF3741 FAMILY PROTEIN 6 94 - -
Amo13g3471 721 MobiDBLite consensus disorder prediction 450 464 - -
Amo13g3471 721 Pfam Domain of unknown function (DUF4378) 558 698 IPR025486 -
Amo13g3471 721 PANTHER DUF3741 FAMILY PROTEIN 95 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3471 Amo-Chr13 117072156 117075902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3471 559 708 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 30.921 3.03e-12 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3471 13 117072156 117075902 Amo13g3471 13 117072156 117075902 ECH