Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3451 ATGCAGACCATGTTAGATTTCTCAAGCTCTAATGTGATAATGATGTTTCAATGGAAAGAATTCATGCTTTTATTCATTACCTTTATTCTTTTGTGTTCCCAAACTTATTCTGCCAGCAGCAATTGTGTCTTTAACATTCAATACTCTTCAACCTTGAGTAACTCAAACTGTGAACATCATAGTTGGGGAGGATTCATCAATACTTGTTGTCAACCACTTTTTGATGATTATCTATATGCCTTGGGGCTTCATGCCAACAAAACTGGAAAGATATTTTTGAACCCCTCAGAGCAAGAAAACTGCTTCGTGCCGGCGAAGAATTTTAAGCTCTGCGGCGGGGTCAAGAAGTTGACAAGGGGAGCCGGTGGTTGCTCTGATTACACTGTTATGGATGTCACCAAGAAGCTTGGTGAAAATTTAAGGAGATTAGATGAAGATTGTATGAATGACAAGCCAAATGGAAACTGCAGTTCATGCTTGAAATCATGGGAGGATATAGTTGTAAGATCAGAGGATACAAAGGAATCAGAATCAGAGAGTTTCAGTGATGATGTTTGTAGGTTTGCTGTTCTTATCTCAATGACAAGCATCAAAGTTTATGATAGAGAATCAATTCAGAAAGTTTATAAATGTATAGGGGGAAACACCATTTCTGAAGATAAGCAAGAAATTCAAGCAAAGGGGGGCAATGCTAAGCCAGGTCTCAAGATTCTAGCCTTTGCTTTAACTGGAGTCACAGTAGTAGTACTTCTTGCAGCACTTGCATTTTTTGTCAGAAGAAAAAGAGGTGCTACAACTCCCACATTACTAGAAGTTTATGAGGATTCAGCATCAGTTAAAATAACTTTGAAGGATGTTTATGTAGCAACTAACAATCTCAGCGCCGCGAATTTCATTGGCCAAGGTTCGGCAGGGAAAGTGTACAAAGGTATACTCTCCAATGGTCTACATGTTGCAGTGAAGCATATTACCAATGGAAGTTACATGGAAACATTTGTTAGAGAAGTGAAAAGCCTTTCCCATGTTAAACATCCGAACCTTGTTACGCTGCTCGGATACTGCGAAAACAATGAATCTGAATGCTTCCTAGTCTATGAACTGTGCTGCAATGGAAGCCTGTCACATTGGCTATTTGACTATGATAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCTGTTGATAGTGCAAGAGGCCTCAAGTTTCTACAAAACTACCCAGGTGGCTGCATTGTTCACCGTGATATAAAGCCAGCAAACATTCTTCTTGATGCCAATTTTCAAGCAAAACTTTCAGACTTCGGGTTGTCCAAGGTTATGGATGTGGATCAATCCTATGTGAGCTCCGAAGTGAGAGGAACATTTGGTTATATAGATCCTGAGTATAGGACAAATCACCATGTGAATGCCTCTGGAGATGTTTACAGCTTTGGCATAGTGTTGTTGCAACTTCTATCAGGACAAAGGCTCCTTCACAGCAATTTTCACAGACCAATGTCACTAAGTAAAATGGCCAAAGATTCTGCTAGAGGTGGCGATATTTCAGAATTTGCAGACCCTAAACTCAATGGAGAGTATTCTGTAGAAGCATTTGGCATCATACTGAAGCTAGCTTTGTCTTGCATAGGGCTCAAGGAACAAAGGCCCTCTATAGCAAAAGTGTTACATAGTCTAGAAAAGGCACTAGATATCTCATCATCATAA 1704 0.3973 MQTMLDFSSSNVIMMFQWKEFMLLFITFILLCSQTYSASSNCVFNIQYSSTLSNSNCEHHSWGGFINTCCQPLFDDYLYALGLHANKTGKIFLNPSEQENCFVPAKNFKLCGGVKKLTRGAGGCSDYTVMDVTKKLGENLRRLDEDCMNDKPNGNCSSCLKSWEDIVVRSEDTKESESESFSDDVCRFAVLISMTSIKVYDRESIQKVYKCIGGNTISEDKQEIQAKGGNAKPGLKILAFALTGVTVVVLLAALAFFVRRKRGATTPTLLEVYEDSASVKITLKDVYVATNNLSAANFIGQGSAGKVYKGILSNGLHVAVKHITNGSYMETFVREVKSLSHVKHPNLVTLLGYCENNESECFLVYELCCNGSLSHWLFDYDKVLSWIQRLEIAVDSARGLKFLQNYPGGCIVHRDIKPANILLDANFQAKLSDFGLSKVMDVDQSYVSSEVRGTFGYIDPEYRTNHHVNASGDVYSFGIVLLQLLSGQRLLHSNFHRPMSLSKMAKDSARGGDISEFADPKLNGEYSVEAFGIILKLALSCIGLKEQRPSIAKVLHSLEKALDISSS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3451 567 Gene3D Transferase(Phosphotransferase) domain 1 369 566 - -
Amo13g3451 567 ProSiteProfiles Protein kinase domain profile. 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3451 567 SUPERFAMILY Protein kinase-like (PK-like) 276 558 IPR011009 -
Amo13g3451 567 PANTHER OS01G0750732 PROTEIN 37 566 - -
Amo13g3451 567 Pfam Protein kinase domain 297 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3451 567 PANTHER - 37 566 - -
Amo13g3451 567 Pfam SPARK 38 179 IPR043891 -
Amo13g3451 567 Gene3D Phosphorylase Kinase; domain 1 256 367 - -
Amo13g3451 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Amo13g3451 567 SMART serkin_6 293 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3451 Amo-Chr13 116103294 116106133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3451 236 559 Receptor kinase-like Gene Family AT1G70130 38.872 1.56e-59 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Amo13g3451 Pkinase 5.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3451 - - gmx:100790181 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3451 13 116103294 116106133 Amo13g3451 13 116103294 116106133 ECH