Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3444 ATGGGCTTCCGTTTACCTATTATCAGAAAATCTACACAAGTAACCTCAAAGAGTGGAGAAGTCCCAAAAAGGTATCTTGTAGTGTATGTGGGAGAAAACATGAAGAGGTTTGTGATTCCAATAGCATACTTGAACAAACCTTCTTTTCAAGACTTTTTGAGTAGAGCAGAAGAAGAATTCGGATATGTTCATCCGATGGGTGGCCTCATAATTCCATGCCGAGAAGATATGTTCTTAGATATCATATCAGTTCAGGCTTAA 261 0.3831 MGFRLPIIRKSTQVTSKSGEVPKRYLVVYVGENMKRFVIPIAYLNKPSFQDFLSRAEEEFGYVHPMGGLIIPCREDMFLDIISVQA* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3444 86 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Amo13g3444 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 83 IPR003676 GO:0009733
Amo13g3444 86 PANTHER SMALL AUXIN-UP RNA-RELATED 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3444 Amo-Chr13 115829079 115829339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3444 20 84 Calmodulin-binding Proteins AT4G34750 44.615 3.52e-15 64.3