Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3438 ATGTCGGAGCTCGGAGGCGGCAACTGTTTTTCGCGTCCCTTGCTCGGTGTCAATGTCGGTCTTGCCCTTGTTGAAGGAATCGTTGCTTTCGTTGCGTTGTTTCAGTGTTGTGCACAATTTGGGGAGGTTTTGGTAGGGAACGGTTCACGCAGAGACTTTCTTGGATTGGCTTTGGGAGTCTCAAGCCTCTTTGTTGGTTCATTGGAAGGCAAAGGAGCTGGTTTGCCCCCAGAAGATAAGCCGAAACTATGTGATGAAGCTTGTGAGAAGGAGCTTGAAAATGATGCTTATCTCCCTCAACGGCTTTTAGATAAATTGATGTTCATTTATAATTATGTGGAGATGGCTCGAGTAACAGGTGTCCCAATTTCTTTTCTGCTTGCTAGAGACCAAAGCATTAAGGTGACTTCTGAAGATGTTCGGAAACTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGCTAGTATTGGAATGGATAACTTGAACGCTTAA 531 0.4407 MSELGGGNCFSRPLLGVNVGLALVEGIVAFVALFQCCAQFGEVLVGNGSRRDFLGLALGVSSLFVGSLEGKGAGLPPEDKPKLCDEACEKELENDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLARDQSIKVTSEDVRKLNLPPESVNKTPSGETFVKSNLQKASIGMDNLNA* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3438 176 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 94 142 - -
Amo13g3438 176 Gene3D - 69 148 IPR036397 GO:0003676
Amo13g3438 176 SUPERFAMILY Ribonuclease H-like 93 134 IPR012337 -
Amo13g3438 176 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 94 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3438 Amo-Chr13 115716392 115720212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3438 135 167 Core DNA Replication Machinery Family AT5G63960 81.818 3.31e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3438 K02327 - aip:110263830 141.354