Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3417 GTTAACACTAAGATATTTTTCATCTATAAAAAAACTTTTCAGGATCGTGCATCTGAGATAGATTGTGTACAAAAGTGGAAGGATGAAATACGCAATATTTCGGCATACTTGTCAAATGTTGAATTCACGTATTGTGATCCTGTCAAAAAATTTGATAGATCAAAGGTGAAAGGTGTCGTTGCAAAACTCATCAAAGTAAAGGATAAGTCCACAATGACTGCCCTAGAGGTTACAGCAGTGTTCCCGCTAGAGTTCAACAATAGGCTGCTAGATTGGCCAAGGAACGACAAGGCAACCATCCTCACTGATACGATTCAAATGCTTAAAGATTTAACTGCCAAAGTTAATAGGTTGAAAACCGAGCATAAAGCGCTTTCTGATGAGTCCCGCGAGCTAATGCAAGAGAAGAACGAACTCAGGAAAGAAAAGGCATCGTTTTGTAATCTTTCTATTCTATAG 459 0.3834 VNTKIFFIYKKTFQDRASEIDCVQKWKDEIRNISAYLSNVEFTYCDPVKKFDRSKVKGVVAKLIKVKDKSTMTALEVTAVFPLEFNNRLLDWPRNDKATILTDTIQMLKDLTAKVNRLKTEHKALSDESRELMQEKNELRKEKASFCNLSIL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3417 152 Gene3D - 24 144 IPR036638 GO:0046983
Amo13g3417 152 Coils Coil 101 145 - -
Amo13g3417 152 PANTHER TRANSCRIPTION FACTOR BHLH121 91 146 IPR044579 GO:0003700|GO:0055072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3417 Amo-Chr13 114674009 114675203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3417 83 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 63.077 4.07e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3417 K06674 - gmx:100780995 113.235