Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3410 ATGATCATTCCGGAGAAGAACCGCAAAGAGATCTGCAAATATCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAACCTGGCGAAGCACCCTGAGATTGAGGTGCCAAATCTACAGGTGATTAAGCTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTATTGGTTTCTCACCAATGATGGCATTGAACACCTCAGAACCTACCTCAATCTTCCTTCGGAAATTGTACCTGCCACTCTAAAGAAACAAGCAAAGGCTCCAGGTCGTCCATTTGGTGGTCCACCTGGTGATCGCCCTAGGGGTCCTCCACGCTTTGAAGGAGAGCGTAGGTTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGTCCTGGTGGTGATTTTGGAGGTGATAAGGGAGGGGCACCTGCAGATTACAAGCCTTCTTTTGGGGGTGCTGGTGGAAGACCAGGCTTTGGCCGAGGTTCTGGCAGTTTTGGTGGGGCACCACCATCTAGCTCAAATCTTCCATGA 546 0.5 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIEVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKAPGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYKPSFGGAGGRPGFGRGSGSFGGAPPSSSNLP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3410 181 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 180 - -
Amo13g3410 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Amo13g3410 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 180 IPR037447 -
Amo13g3410 181 Gene3D - 1 104 IPR036388 -
Amo13g3410 181 MobiDBLite consensus disorder prediction 112 128 - -
Amo13g3410 181 MobiDBLite consensus disorder prediction 93 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3410 Amo-Chr13 114309008 114311717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3410 1 181 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.374 6.99e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3410 K02947 - csin:114270063 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3410 13 114309008 114311717 Amo13g3410 13 114309008 114311717 ECH
Amo05g2425 05 51808590 51809154 Amo13g3410 13 114309008 114311717 PCT