Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3373 ATGGCGGAGCATCACGAGCACGAGGAAGGGAAGGGGGAATCGCTGCTGGATAAGATTTCTGGAAAGATCCACGACCACGACGACTCATCGTCTTCCTCCGATTCCGACAACGAGAAGAATAGCACCTCTGAATCCATCAAGAACAAGGTCTTCAGGCTCTTCGGCAGGGAGAAGCCAGTTCACAAGGTCCTTGGTGGTGGAAAACCGGCTGATGTGTTTCTATGGAGAAACAAGAAGATATCTGCAACGGTGCTTGGAGTTGCGACTGCTGTGTGGGTTCTGTTTGAATTGCTTGAATACCATCTCCTCACTTTGGTTTGTCACCTCCTGATTTTTGCACTGGCCGGGTTGTTCTTGTGGTCCAATGCCTCAAATTTCATCAACAAGAGGCCACCTCAGATTCCAAACCTCCATATTCCCGAGGACCCTGTTCTACAATTTGCCTCTGCTCTTAGAATTGAAATTAACACAGCTCTTGATGTATTACGGGATATTGCATCAGGAAGGGATCTCAAGATGTTCCTCACGGTCATTGCTGGATTATGGGTTTTCTCCATTCTGGGAAGCTGTTGCAACTTCTTGACGTTGTTCTACATTGCCTTTGTTTTGCTTCACACTGTTCCTGTGCTCTATGAGAAGTATGAAGACCAGGTGGACTCCTTTGCTGAGAAGGCAACAGCGGAGATTAAGAAGCAGTATGCAGTGTTTGATGCCAAGGTTTTGAGCAAGATTCCCAGAGGACCTTTGAAAGATAAAAAGAAGGATTGA 768 0.4661 MAEHHEHEEGKGESLLDKISGKIHDHDDSSSSSDSDNEKNSTSESIKNKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISATVLGVATAVWVLFELLEYHLLTLVCHLLIFALAGLFLWSNASNFINKRPPQIPNLHIPEDPVLQFASALRIEINTALDVLRDIASGRDLKMFLTVIAGLWVFSILGSCCNFLTLFYIAFVLLHTVPVLYEKYEDQVDSFAEKATAEIKKQYAVFDAKVLSKIPRGPLKDKKKD* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3373 255 Pfam Reticulon 70 225 IPR003388 -
Amo13g3373 255 ProSiteProfiles Reticulon domain profile. 69 255 IPR003388 -
Amo13g3373 255 PANTHER RETICULON-LIKE PROTEIN 1 253 - -
Amo13g3373 255 MobiDBLite consensus disorder prediction 21 43 - -
Amo13g3373 255 PANTHER RETICULON 1 253 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3373 Amo-Chr13 111661686 111664687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3373 - - gmx:100779587 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3373 13 111661686 111664687 Amo13g3373 13 111661686 111664687 ECH
Amo13g3373 13 111661686 111664687 Amo17g2607 17 125370209 125373964 ECH
Amo13g3373 13 111661686 111664687 Amo03g2381 03 101018721 101021657 hybridization