Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3353 ATGTGGAGAGAAGCTTTCATGAAGGCATATAAGGCCATGGACAAAGAGCTGAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACAGCTGTAACCATAGTGAAGCAGAAAATAGGGAATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTGAATCCTGATTTGCCAAGTCAAATCAAAAGGTGCAAGGGCAAGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACTTGGATTAGCAATTGCTAGAGTATTTGGCGATTTTTGTTTGAAGGTTTACGGTGTCATTTCTATACCAGAATTTTCTCACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGACATAGAAGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGGCACCAACTAGAGCATCAGCAGCAAGGGTTCTGGTGGATTCTGCGGCCCGAGAGTGGAAAAGCAAAAGCAAGCCTCATAGAATATTTTTTGGTTTGATGAGAACATTATAA 588 0.4337 MWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQKIGNSRAIMGSKDSNDSMVAIQLTIDLNPDLPSQIKRCKGKVFALQDEPEVPRVWLPFDDALGLAIARVFGDFCLKVYGVISIPEFSHRLLTDKDEFIVLASDGHRRDVLSNEEVVEIVSTAPTRASAARVLVDSAAREWKSKSKPHRIFFGLMRTL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3353 195 ProSiteProfiles PPM-type phosphatase domain profile. 1 195 IPR001932 -
Amo13g3353 195 CDD PP2Cc 1 180 IPR001932 -
Amo13g3353 195 PANTHER ALPHABET, ISOFORM E-RELATED 1 182 - -
Amo13g3353 195 PANTHER - 1 182 - -
Amo13g3353 195 Pfam Protein phosphatase 2C 4 176 IPR001932 -
Amo13g3353 195 Gene3D - 1 185 IPR036457 -
Amo13g3353 195 SMART PP2C_4 1 175 IPR001932 -
Amo13g3353 195 SUPERFAMILY PP2C-like 2 176 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3353 Amo-Chr13 109964208 109965082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3353 1 181 PP2C-type Phosphatase Gene Family AT1G03590 73.298 3.11e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3353 - - aip:107612736 311.612