Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3346 CATGCATATAGAGATGGTCGTCTTGAGGAGGTAGTTCTGCAACATCTTGGAGCTGCAAATGGCGATACAAGACCTCTGTGGTGTGAAAATTATACCAAACCATCTTGCAGTGATAGAGAGTATTTCTTTCTGGGACAATTGCCATATCTAACTAATGCAGAATGTCTTATTTATGAGGGATTAACTGTTGTGGTGCTAATCATACATACTTTCTTCCTAATATCATATGAAGGGTCCCGTATATATTGGAGAAAGGCTATAAATGCAGCAGATTATAATCAAGTGTTTATGTCATTGAGTGACGGGGTAGAAGTAGAAAGAAGAGATGAGGAATACTGA 339 0.3835 HAYRDGRLEEVVLQHLGAANGDTRPLWCENYTKPSCSDREYFFLGQLPYLTNAECLIYEGLTVVVLIIHTFFLISYEGSRIYWRKAINAADYNQVFMSLSDGVEVERRDEEY* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3346 112 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 24 89 - -
Amo13g3346 112 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 24 89 IPR044581 GO:0005245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3346 Amo-Chr13 109570333 109571884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3346 24 88 Ion Channels AT4G03560 63.077 1.18e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3346 K16900 - gmx:100819307 114.775