Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3331 ATGGAGTTCCTACGTATTTTGTTATCTTCCATTTGTTTGTTGGTTGTGATTGATCACTGGCAAGGAAATGCTGAACCTGTTGAGGATAAGCAAGCTTTGCTTGATTTTGTGAACAAATTCCCTCCTTCTAGACCTCTGAATTGGGATGAGACCTCCTCCATGTGTGCCAATTGGACCGGAGTCACTTGCAGTGAAGATGAGTCCCGGGTCATCGCCATTCGCCTGCCGGGGGTTGGATTCCATGGCCCAATTCCGCCGGATACTGTTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGGCGGATACCTTCTGACTTTTCTAATTTGAAGAACTTAACTTTACTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCCCTTTCCAATTTGACCGAGCTTGCTGGTTTGAACCTTGCAAACAACTCTCTTTCTGGCGAAATTCCCAATCTCCAGTTGCCAAGACTGCAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCTGATTCGTCCTTTTTTGGAAATAATATTTCTCTTGGGAGCTCTGCTGTTGTTCCGCCAGTGCCTCCTCCGGTTTATGGGCCTTCTTCAAGGTCTAAGAAGCACGGAAGGCTCAGCGAAACAGCGCTGCTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTGTGGCATTTGTTTTCTTGATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGATGATGATGCCTTCAGTGGGAAGTTGCACAAGGGTGACATGTCTCCCGAGAAAGCTGTATCGAGGAACCAGGATGCGAATAATAAGCTGTCTTTCTTTGAGGGGTGTAATTATGCCTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACGTTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGTTGGAAAGAAGGATTTTGAGCAACACATGGAAATAGTAGGAAACCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAATTAATGGTATATGATTACTATAGCCAGGGTAGTGTCTCGTCAATGTTACACGGTAAAAGAGGAGAGGAAAGAGTGGCTCTAGATTGGGATACTCGGCTGAAAATAGCCCTAGGTGCTGCCAGAGGCATTGCTCGTATCCATGTTGAGAATGGAGGTAAACTCGTGCATGGCAACATCAAATCCTCAAATATCTTCCTCAATACTAAACAGTATGGTTGTGTATCCGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCTTACCCATCTCACGAGCTGCTGGTTACCGAGCACCTGAAGTTACGGACACCAGGAAAGCGGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTTGAGCTTCTGACAGGGAAATCTCCTATTCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCGGTTGTGCGAGAGGAGTGGACAGCCGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCAATGTCATGCGTGGTAAGGATGCCCGACCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCGGCCGTCTTCCGACAACCAAGCAGAACAGAAATTACCACAACATGACATCGATAATTCCCCTTCTTCCTCTCCCTCACCCTTGCCAAAAGGAAGTGAATGA 1920 0.4562 MEFLRILLSSICLLVVIDHWQGNAEPVEDKQALLDFVNKFPPSRPLNWDETSSMCANWTGVTCSEDESRVIAIRLPGVGFHGPIPPDTVSRLSALQTLSLRSNVITGRIPSDFSNLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTELAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNISLGSSAVVPPVPPPVYGPSSRSKKHGRLSETALLGITIACGVLGLVAFVFLIFVCCSRRRGEDDDAFSGKLHKGDMSPEKAVSRNQDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKRGEERVALDWDTRLKIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETRPSSDNQAEQKLPQHDIDNSPSSSPSPLPKGSE* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3331 639 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Amo13g3331 639 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3331 639 MobiDBLite consensus disorder prediction 602 639 - -
Amo13g3331 639 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Amo13g3331 639 SUPERFAMILY L domain-like 39 209 - -
Amo13g3331 639 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Amo13g3331 639 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Amo13g3331 639 Pfam Leucine rich repeat 84 129 IPR001611 GO:0005515
Amo13g3331 639 Gene3D Transferase(Phosphotransferase) domain 1 404 624 - -
Amo13g3331 639 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Amo13g3331 639 Gene3D Ribonuclease Inhibitor 138 226 IPR032675 -
Amo13g3331 639 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3331 639 PANTHER OS05G0588300 PROTEIN 23 610 - -
Amo13g3331 639 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Amo13g3331 639 PANTHER PROTEIN, PUTATIVE-RELATED 23 610 - -
Amo13g3331 639 SUPERFAMILY Protein kinase-like (PK-like) 332 596 IPR011009 -
Amo13g3331 639 MobiDBLite consensus disorder prediction 603 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3331 Amo-Chr13 108592658 108596538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3331 1 634 Receptor kinase-like Gene Family AT4G23740 65.062 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo13g3331 Pkinase 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3331 - - adu:107479781 1108.59