Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3318 ATGGTGCTGGTGATGGGACATGCCACCATTCAGAAAGAATTGGTTTTCCATTCAGCCTTTCCAGATCAGTGGCAGTGTGTGAAGGAGAGGAAGAAAGAAGCAATGGCAATTCCCATATTGAGGGCTGAAATCATTCTTCACTCTCAACCACTCCTTCATTCTTCTATATCTGGTGGTATTGATGAAACTGCCAAAAAGAAGGAAAGACTGTTGCTTCCTTGTTCTTCTTCTTCTACTTATGAGCTCAACCCTGCAATTCGGTTTCTTTGTTCATTTTTTGTTGGGTCTTGCCTCCTTCCTCATTCAGACAAGGTTGATAGAGGTGGGGAAGATGCTTTGCTTGTCAGCAACTATAATGGGGGAGTTCTTGCTATTGCTGATGGTGTTTCTGGTTGGGCAGAAGAGGATGTGGATCCTTCGTTGTTCCCACATGAATTGATGGCAGTCCAAAGAATTGCAATTGGGTCTCCTAGAGAGGTTGCTCAGCCTGATGCAATTAGAGCAGCATTTGCAGAATTCTTCTCAACGCTTATTTTTGTTTTTGCTGCTGAAGGCTCTGACATGTCTTATAATAACCTCACTCAAGCTCTTCTATTCCTTTCTCATTTCATGGGAGATATCCATCAGTCTTTCTTCACTTTTTATGCATTGGTTGTTGAGAGATTTGGCCAGAGGATCGGGTTGTTTTGCCTGTTTGCGCTCATTTTTCCTGCCTTTCTTTGTGTAGTTTATGAACGGTTAGTTCTTCTTTTCCTTACATACTTTAAAATTGATGTTTCTGTATTTGAATTCATTCTTCAAGTCAAGTTGACTCTTCCTCTAGCTATTCCAGTAATAGCATTTATGCATAGCTCCAAGCACACTCACTCAAGATATTGGTTTCTGGCTATAGAAGAAGCTGCTGTTGAGGAATCTAATGGGAATAAGGATGCTATGGACCTTGAGATTCGTTCAAGAGGGAATGTGGTGGAGAAACTAGTAAGAACAAAGCACCATAAGGAAATTACTTTCCCTTTGGTGATCAACTCTTCTGAATCAAAACCTATCAGGTTCAAGAAGAATTCATGCACATATGGCTGA 1080 0.4102 MVLVMGHATIQKELVFHSAFPDQWQCVKERKKEAMAIPILRAEIILHSQPLLHSSISGGIDETAKKKERLLLPCSSSSTYELNPAIRFLCSFFVGSCLLPHSDKVDRGGEDALLVSNYNGGVLAIADGVSGWAEEDVDPSLFPHELMAVQRIAIGSPREVAQPDAIRAAFAEFFSTLIFVFAAEGSDMSYNNLTQALLFLSHFMGDIHQSFFTFYALVVERFGQRIGLFCLFALIFPAFLCVVYERLVLLFLTYFKIDVSVFEFILQVKLTLPLAIPVIAFMHSSKHTHSRYWFLAIEEAAVEESNGNKDAMDLEIRSRGNVVEKLVRTKHHKEITFPLVINSSESKPIRFKKNSCTYG* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3318 359 PANTHER PROTEIN PHOSPHATASE 2C 35 173 IPR039123 -
Amo13g3318 359 SUPERFAMILY PP2C-like 96 181 IPR036457 -
Amo13g3318 359 PANTHER PROTEIN PHOSPHATASE 2C 26-RELATED 35 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3318 Amo-Chr13 106492057 106495269 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3318 147 194 Major Intrinsic Protein MIP AT4G01470 66.667 5.61e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3318 K17508 - ahf:112732462 458.373