Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3223 ATGTGTATCCCTTTTGATTTTCTGGAAATCAGGACTTATGACAAGGCTGCTATCAAATACAATGGAAGGGAAGCAGTGACTAACTTTGAGCCAAGTACATATGAAGGAGAGATGAAATCTCCAGCCATCAATGAAGCAACTCTAGGACATGGTCTGAAAGAAAACAGGGGGCAACTCCAGTTCCCCTGGGTCCCTTACAGCATGCATGCTGGAAGAACAATGGTATAA 228 0.4342 MCIPFDFLEIRTYDKAAIKYNGREAVTNFEPSTYEGEMKSPAINEATLGHGLKENRGQLQFPWVPYSMHAGRTMV* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3223 75 Gene3D AP2/ERF domain 10 31 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3223 Amo-Chr13 98714565 98715320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3223 11 47 AP2-EREBP Transcription Factor Family AT4G36920 54.054 7.88e-08 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3223 K09284 - aip:107633371 140.969