Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3207 ATGGAACACAGTTTCTACCTCTCCCTTCTACTTCTCTTTGTTTCATTCGTATCTCTTTCTCTCTTCTTCCTCTTRTACCGTCACTGGTCTCCGTTTACGGCCCCAAACTTGCCACCGGGAAGGATGGGTTACCCAATWCTCGGGGAGAGCATCGAGTTCSTGTCCACCGGATGGAAGGGACATCCTGAGAAGTTCATCTSTGATCGCATWATCAGGTTTTCKTCTGAAATCTTCAAGACCTKCATCTTTAACGAACCRACRGTTGTGTTMTGCGGACCCACATGCAACAAGTTCTTGTTCTCCAACGAGAACAAGCTGGTTAACGCGTGGTGGCCGGAGAACGTTAAAAAGATTTTCCCAACAACGATCGATTCCAAACTGGAGTCCAAGAGGATGAGGAAGTTGCTACCACAGTTCCTCAAACCTGAAGCTCTGCAACGCTATGTCGGCATCATGGATTCCATAGCTCAAAGGCATTTTMCTTCCCATTGGGAAAACAAGACGCATATCACCGTTTTTCCTTTGGCCAAGAGGTACACGTTCTTGTTAGCTTGTCGTTTGTTCATGAGTGTGGAGGATGGAAAAGACGTAGAAAAAATAGAAGGCCCTTTTCATCGTTTGGCGTCCGGAATCTTAACACTGCCAATTGACTTGCCTGGAACGGCATTCAACAAAGGAATCAAAGCATCAAAGTTCATAAGGAATGAACTTTTGAGGATCATAAAGCAGAGAAAGGTGGAGTTGGGTGAAGGGAAAGCGTCCCCAYCACAAGACATACTGTCTCACATGTTGTTGACACCCGATGAGGATGGACATTACATGAATGAAATGGATATTGCTGATAAGATCCTTGGCCTTTTGATTGGAGGACATGACACTGCTAGTGCTGCATGCACTTTCATAGTCAAATACCTTGCTGAGCTTCCTCATGTTTATGATCAAGTATACAAAGAGCAAATGGAAATAGCAAAATCAAAATCTGAAGGAGAGTTGTTAACTTGGGATGACGTCCAAAAGATGCGATACTCTTGGAATGTAGCTTGTGAAGTAATGAGACTTGCTCCTCCACTCCAGGGAGGTTTCAGGGAAGCCATCACTGACTTCATCTTCAATGGCTTCTCAATTCCGAAAGGATGGAAGTTATACTGGAGTGCGAATTCGAGTCATAAGAATCCAGAATATTTTCCAGAGCCGCAGAAATTCGATCCAAGTAGATTCGAAGGCAAAGGACCAGCTCCTTACACTTATGTGCCATTTGGTGGAGGACCTAGAATGTGCCCTGGTAAAGAGTATGCAAGATTGGAAATACTGGTTTTCATGCACAACCTAGTCAAACGCTTCAAGTTGCAAAAATTGATTCAAGATGAAAAAATTATAGTTGATCCAATGCCCACACCTGCAAAGGGCCTTCCAGTCCGCCTTTATCCTCACAAAGCCTGA 1440 0.4389 MEHSFYLSLLLLFVSFVSLSLFFLLYRHWSPFTAPNLPPGRMGYPILGESIEFXSTGWKGHPEKFIXDRIIRFSSEIFKTXIFNEPTVVXCGPTCNKFLFSNENKLVNAWWPENVKKIFPTTIDSKLESKRMRKLLPQFLKPEALQRYVGIMDSIAQRHFXSHWENKTHITVFPLAKRYTFLLACRLFMSVEDGKDVEKIEGPFHRLASGILTLPIDLPGTAFNKGIKASKFIRNELLRIIKQRKVELGEGKASPXQDILSHMLLTPDEDGHYMNEMDIADKILGLLIGGHDTASAACTFIVKYLAELPHVYDQVYKEQMEIAKSKSEGELLTWDDVQKMRYSWNVACEVMRLAPPLQGGFREAITDFIFNGFSIPKGWKLYWSANSSHKNPEYFPEPQKFDPSRFEGKGPAPYTYVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKLQKLIQDEKIIVDPMPTPAKGLPVRLYPHKA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3207 479 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 Pfam Cytochrome P450 38 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 SUPERFAMILY Cytochrome P450 31 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PANTHER CYTOCHROME P450 26 11 475 - -
Amo13g3207 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Amo13g3207 479 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3207 479 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 11 475 - -
Amo13g3207 479 Gene3D Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3207 Amo-Chr13 97450826 97455425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3207 27 386 Cytochrome P450 AT5G36110 57.534 9.86e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3207 K20667 - gmx:100801007 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3207 13 97450826 97455425 Amo13g3207 13 97450826 97455425 ECH
Amo13g3207 13 97450826 97455425 Amo03g1843 03 58246746 58252077 hybridization