Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3203 TGTTCGACGAAATGCCTGAATCATGCACTCCCTCACCACCGCACCCTCTTTTTCTTCCCTTTCTTTCCATTTCTTTCCCCACCGCCACCGCCACACCCTCTTTCAGTTAACTCCTCCCTTCATCTTCTCCTTCCGGTACACCACCGCCAAGAGGCTCCAGGTGCAGCTCCACGTGGAGGAGGAGAAATCACTGAGGAAGAAAAAAGGGAGGAAGGGTCTTTGCTGCAAGGAGGACTTGGTTATGAGCTAGTGCCTCAGTTTAGTTTCTTAGATTTGAGACGGGATATCGAAGTTGAGGAGTCAGGCATTGAGGGTATATTGAATCGGCTGGAGAGACAGAGAAGTAATTCCTTTGGACTTGGGTTAACAGAGAAAGATGAAAGTGATCCTTCCAGAAACAGTGAAGATAAAAATACAGATCAGAAGAACTCATCAGATGATCTAGCAAAGTATTCCGATGCTTGGGAATTCCAAGAAACTGAGATAATGAATGCTCAGGACAGGCTGCGCTCCATACGTGCTAAGTTGGATGCACACAAAATTGTTGAAGAGAAGCAGAAGAGGATTAATAATGCTCACAGAGCCTTGCAAATTCTGAAGATGATTTGTGTAGTTTGGCATAATCCAGCTTCACAAGTATATTTAGTAGGATCCTTTGATGGTTGGTCCACCCAGAGAAAAATGGAGAAATCAAATACTGGCATGTTTTCTTTGAACTTGCAGCTATATCCTGGAAAATACGAGATCAAATTCATTGTTGATGGTGAATGGAAAGTTGATCCACTGCGGCCTATTGTTGTTACCGACAAAGGTTATGAGAACAATCTCCTCGTGGTTCCTGATTAG 846 0.4397 CSTKCLNHALPHHRTLFFFPFFPFLSPPPPPHPLSVNSSLHLLLPVHHRQEAPGAAPRGGGEITEEEKREEGSLLQGGLGYELVPQFSFLDLRRDIEVEESGIEGILNRLERQRSNSFGLGLTEKDESDPSRNSEDKNTDQKNSSDDLAKYSDAWEFQETEIMNAQDRLRSIRAKLDAHKIVEEKQKRINNAHRALQILKMICVVWHNPASQVYLVGSFDGWSTQRKMEKSNTGMFSLNLQLYPGKYEIKFIVDGEWKVDPLRPIVVTDKGYENNLLVVPD* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3203 281 CDD E_set_AMPKbeta_like_N 201 279 - -
Amo13g3203 281 MobiDBLite consensus disorder prediction 51 74 - -
Amo13g3203 281 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 98 135 - -
Amo13g3203 281 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 134 279 - -
Amo13g3203 281 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 98 135 - -
Amo13g3203 281 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 134 279 - -
Amo13g3203 281 MobiDBLite consensus disorder prediction 125 147 - -
Amo13g3203 281 Gene3D Immunoglobulins 195 281 IPR013783 -
Amo13g3203 281 Pfam Glycogen recognition site of AMP-activated protein kinase 204 279 IPR032640 -
Amo13g3203 281 SUPERFAMILY E set domains 201 280 IPR014756 -
Amo13g3203 281 MobiDBLite consensus disorder prediction 118 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3203 Amo-Chr13 97261387 97264998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3203 202 281 Protein tyrosine phosphatase (PTP) family AT3G01510 32.927 6.38e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3203 - - adu:107485831 307.375