Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3184 ATGGGGATTTGTTTCAGCATTGAAGATCAAAAGCATCACTCCATCTCCGATTCGAGTTCTAAGCCTCGGCCTCAAGGATATGAATCTGCATCGTCGACGACTCCGCTGAGTTCGATGAATATCAAAGATCTGCGGCAGAGTGCTGGATACTGCAATGTTGATATATTCACGTACGAGGAGCTGAGGCTAGCGACAAAGTACTTCCGCCCTGACTTGATTCTTGGAGAAGGTGGCTTCGGAGTGGTGTATAAAGGTGTCATTGATGATAGTGTGAGGCCAGGCTTCAAGCCCACTCAAGTCGCCATCAAGGAGCTTAATCGTGAAGGATTTCAAGGCGATAGGGAATGGCTCGCTGAAGTTAACTACTTAGGTCAATTCAGTCACCCAAATCTTGTAAAGCTCATTGGATACTGCTGTGAGGATGAACACCGGTTATTAGTCTATGAGTACATGGCAAGTGGCAGCTTGGAGAAACATCTTTTTCGCAGAGTGGGCTCAACACTAACTTGGTCAAAAAGAATGAAGATTGCTTTACACGCTGCAAGAGGGCTTGCTTTTCTTCACGGTGCAGAGAGGCCCATCATATATCGTGATTTTAAGACATCAAATATCCTGCTAGATGCGGATTTCAACGCAAAGCTTTCAGACTTTGGTCTTGCTAAGGATGGGCCAATGGGGGACCAAACCCATGTTTCAACACGAGTGATGGGCACATACGGATATGCTGCTCCTGAGTATGTCATGACTGGGCATTTGACAGCTCGAAGTGATGTGTATGGCTTTGGGGTGGTGCTACTTGAATTGCTTATTGGTAGGAGAGCGTTAGACAAGAGTAGGCCCAGCCGAGAGCATAACTTGGTTGAGTGGGCACGGCCACTGTTGAATCATAACAAGAAACTTCTAAAAATTTTAGACCCTAAAATCGAAGGGCAATATTCAAGTAAAACCGCAATAAAGGTAGCTAATTTGGCATACCAGTGTCTTAGCCAAAACCCGAAAGGCAGACCCCTGATGAGCCAGGTAGTTGAAATTCTTGAAAATTTTCAGTCAAGTGGGGAAAATGAGGAAGAACAAATGATTCAAAATGGCAGCAGCAGCCTAACCATTTATGAGGTTCCGAAGGGCGGCAATGGCAATTCACTTGAAGGCAGGAACCAAAGTCGAAATGAGCTTCATAGGAACGAACGAAGAATAGAAAAAAGCAAGAGTCAGCCTTCAAATCGTAATTTATCCGGTTCTTAA 1242 0.4493 MGICFSIEDQKHHSISDSSSKPRPQGYESASSTTPLSSMNIKDLRQSAGYCNVDIFTYEELRLATKYFRPDLILGEGGFGVVYKGVIDDSVRPGFKPTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKIEGQYSSKTAIKVANLAYQCLSQNPKGRPLMSQVVEILENFQSSGENEEEQMIQNGSSSLTIYEVPKGGNGNSLEGRNQSRNELHRNERRIEKSKSQPSNRNLSGS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3184 413 PANTHER OS01G0588500 PROTEIN-RELATED 26 392 - -
Amo13g3184 413 MobiDBLite consensus disorder prediction 368 385 - -
Amo13g3184 413 SUPERFAMILY Protein kinase-like (PK-like) 49 346 IPR011009 -
Amo13g3184 413 Gene3D Phosphorylase Kinase; domain 1 42 150 - -
Amo13g3184 413 MobiDBLite consensus disorder prediction 1 35 - -
Amo13g3184 413 MobiDBLite consensus disorder prediction 368 413 - -
Amo13g3184 413 PIRSF TyrPK_CSF1-R 163 271 - -
Amo13g3184 413 PIRSF TyrPK_CSF1-R 311 411 - -
Amo13g3184 413 PIRSF TyrPK_CSF1-R 71 176 - -
Amo13g3184 413 CDD STKc_IRAK 74 348 - -
Amo13g3184 413 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 26 392 - -
Amo13g3184 413 Coils Coil 384 404 - -
Amo13g3184 413 ProSitePatterns Protein kinases ATP-binding region signature. 74 103 IPR017441 GO:0005524
Amo13g3184 413 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Amo13g3184 413 MobiDBLite consensus disorder prediction 19 35 - -
Amo13g3184 413 Gene3D Transferase(Phosphotransferase) domain 1 151 371 - -
Amo13g3184 413 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3184 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Amo13g3184 413 MobiDBLite consensus disorder prediction 386 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3184 Amo-Chr13 96224878 96228884 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3184 56 345 Glycoside Hydrolase AT3G07070 51.877 7.34e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo13g3184 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3184 - - gmx:100800465 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3184 13 96224878 96228884 Amo13g3184 13 96224878 96228884 ECH