Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3173 ATGGCGTTTTCACCCACTGAAGGAGGATCGATTAGTACATTGACCAATCCAACCAAAGGCGATAAACAATTCAGTGCGGGTGAATTAGACATGCAAGAGCAAGTAGGACGGAAGTTCGACGAAATTACCGATGTCGTTGTGACTAGAAAGAATGAGCTGGACGACGGACACCAGTTGCCGGATCATAGTGGCGTAGGCGAAGAGGAAATTCCAGTCGTAGGAATGAGTTTTGGTTCGTTGCCTCTCGCACAGAAATTTTATGCAAACTACGCAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACGAATTTCGACAAGACGCGGAAGGAATCAAAGATACCGGTTAATCAATCTATTTATTGCACGCGAGAAGGTTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAACAGAATTATAGCCATGAGATGCAGAGCAAGGATGTATGTCGTGTTGGACAATGAGAATAAATGTTGGGTTGTGTCTAGATTAGAACTGAGGTATTCTCACCCCTGTTCAGCTGAGAAAGTTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCTAAGTGTGTCATTACGTATAACGATGAGGCTGGAATAAGACCCAACAAGACGTATCTAGCACTG 639 0.4476 MAFSPTEGGSISTLTNPTKGDKQFSAGELDMQEQVGRKFDEITDVVVTRKNELDDGHQLPDHSGVGEEEIPVVGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKESKIPVNQSIYCTREGYRESRVNAATRANRIIAMRCRARMYVVLDNENKCWVVSRLELRYSHPCSAEKVVHYHEYRELTMHAKCVITYNDEAGIRPNKTYLAL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3173 213 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Amo13g3173 213 MobiDBLite consensus disorder prediction 1 22 - -
Amo13g3173 213 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3173 Amo-Chr13 95417850 95420853 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g3173 FAR1 1.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3173 - - ahf:112730161 383.259