Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3138 ATGGACTCCTTAGATTTCATTGTTATTTTTGTAGCCATTGTCTCATTCTTCTTCATCCACACATGGCTGTCCAATAGAAATAATCTCGTAATTGATTGGCCCTTCTTTGGTATGCTACCAGCACTTTTATGTCATCTCTCCAATATCCATGATTATGCAACCACTGTTTTGAAGCATTATGAAGGTACTTTCATGTTCAAAGGTCCCTGGCTCACAAACCTTGACTTTCTCATCACCGTTGACCCTATGAATGTGCACCACATTACTAGCAAGAACTTTGACAACTACATTAAAGGGCCTAAGTTCTATGAGATTTTTGAAATCATGGGAGATGGCATCTTTAACATCGATTCCGACAAATGGAAGCGCAACAGGGACACACTACACTCGTTGTTCAAAGCAAACTCGTTTGAGAGTTCGTTTGTGAAAACGATTCATAAGAAGCTCGAGAGTTGCCTAGTTCCACTTCTCAATAATGCAACGGAACTTGGAACCGTTGTGGACTTGCAAGACATTTTTCAGAGATTCACCTTTGACAACATCTGCTTCATAGTGCTGGGTTTCGATCCTAACTCCATTCCTAACAAGCTCATCGAGTTCCCGGAAAACGCTTTTGAGACAGCTTTCAACAAGATGGAAGATGGAATGTTCTACAGACACATTGCGCCAAGATTCTTGTGGAAGCTTCAAAAGTGGCTCCAAATTGGACAAGAGAAGAGCTACGGTGAATGTGGAAAAATAATTGACCAATTCTTGCATCAATTTATATCATCCACATTCCAAGAGCAAAACAAATTCAACTACACCAAAGATGATGATGAATCGAACTTTAACATGCTTAAAGCTCTTGTAATGGAAAGTGGAATGGAAACAATAGAGCCCAAGTTTCTAAGAGACAATGCACTTAATCTCTTAGCAGCAGGAAGGGATGCAATCAGTGCAAGTCTCAGTTGGTTTTTTTGGCTGGTTTCAACCCACCCTGTTGTTGAAGCCAAGATCCTTGAAGAATTTAGAGCAAACCTGATAACCAAGGAAGAAAATTGGTTCATCACTTCAAGGTTAGAAATTCTTAACAAGCTAGTTTATCTGCATGGAGCTTTATGTGAAGCATTGAGACTTTTCCCTCCACTTCCTTTTGAACACAAATCTGCAGTTAAATCTGATATACTTCCTAGTGGGGATCATGTTAATGCAAATACTAGGATACTTTACTCTTTGTACTCGATGGGAAGAATGGAACAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAAAGGTGGATTTCTGAAAAGGGAAGTATCATACAGGTACCATCTTACAAGTTCATAGCTTTCAATGCAGGCCCAAGAAGTTGTTTGGGTAAAAATATAAGCTTTATTCAGATGAAGATCATCGCCATTGCTTTGCTGTTGAATTTTCAGTTTGAGGTGGTGGAAGGGCATAATGTGTGCCCATGTCTTTCTGTTATTCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGAGTTTGTTTTTGATATTGATATTGTTATATATAATATGAAAGATAACTATCATATATATTATTGGTGTAACTATCTTCTATCTACTTGTGTTGGTGGAATACATGAGAGGTTTTAG 1632 0.3854 MDSLDFIVIFVAIVSFFFIHTWLSNRNNLVIDWPFFGMLPALLCHLSNIHDYATTVLKHYEGTFMFKGPWLTNLDFLITVDPMNVHHITSKNFDNYIKGPKFYEIFEIMGDGIFNIDSDKWKRNRDTLHSLFKANSFESSFVKTIHKKLESCLVPLLNNATELGTVVDLQDIFQRFTFDNICFIVLGFDPNSIPNKLIEFPENAFETAFNKMEDGMFYRHIAPRFLWKLQKWLQIGQEKSYGECGKIIDQFLHQFISSTFQEQNKFNYTKDDDESNFNMLKALVMESGMETIEPKFLRDNALNLLAAGRDAISASLSWFFWLVSTHPVVEAKILEEFRANLITKEENWFITSRLEILNKLVYLHGALCEALRLFPPLPFEHKSAVKSDILPSGDHVNANTRILYSLYSMGRMEQIWGEDCLEFKPERWISEKGSIIQVPSYKFIAFNAGPRSCLGKNISFIQMKIIAIALLLNFQFEVVEGHNVCPCLSVILHMKHGLKVKVTKREFVFDIDIVIYNMKDNYHIYYWCNYLLSTCVGGIHERF* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3138 543 PANTHER CYTOCHROME P450 9 506 - -
Amo13g3138 543 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 506 - -
Amo13g3138 543 Gene3D Cytochrome P450 21 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 SUPERFAMILY Cytochrome P450 33 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g3138 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Amo13g3138 543 Pfam Cytochrome P450 33 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3138 Amo-Chr13 92096192 92097989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3138 1 505 Cytochrome P450 AT4G32170 44.423 1.92e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3138 - - gmx:100791312 580.867