Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3125 ATGGCTGGTTGTTTGAGAGCTTCCTCAGCTACTTGTATTTTGGTCCTTTTTGTTGTGTTTGGAATATCTTATGCTGCTAAGGATATCTTGGTTGGAGGCAAGGTTGATGCATGGAAGGTTCCATCTTCACCCTCTGATTCCCTCAACAAATGGGCTGAGAGGGCTAGGTTTCAAGTCGGAGACCGTCTTGTGTGGAAATATGATGGTGGGAAAGACTCTGTGTTGGAAGTGAACAAAGAGGATTATGGGAATTGCAACACATCAAATCCAATTAAGAAGTTCAATGGCGGCAACACTAAGGTGGAGCTGGACCACCCTGGACCATTCTACTTCATAAGTGGAGCAAAGGGTAGCTGTGAGCAAGGTGAGAAGCTTCATGTGGTGGTCATTACTCCAAGGGGTGCACCTGCACCTTCACAGGCACATACACATGCACCTTCTCCTGCTCCTTGCTTTTTTTAG 462 0.4632 MAGCLRASSATCILVLFVVFGISYAAKDILVGGKVDAWKVPSSPSDSLNKWAERARFQVGDRLVWKYDGGKDSVLEVNKEDYGNCNTSNPIKKFNGGNTKVELDHPGPFYFISGAKGSCEQGEKLHVVVITPRGAPAPSQAHTHAPSPAPCFF* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3125 153 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Amo13g3125 153 PANTHER BLUE COPPER PROTEIN 11 139 IPR039391 GO:0009055
Amo13g3125 153 Gene3D - 25 133 IPR008972 -
Amo13g3125 153 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Amo13g3125 153 Pfam Plastocyanin-like domain 38 122 IPR003245 GO:0009055
Amo13g3125 153 CDD OsENODL1_like 27 130 IPR041846 -
Amo13g3125 153 PANTHER EARLY NODULIN-LIKE PROTEIN 3 11 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3125 Amo-Chr13 91563077 91564239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3125 6 133 Phytocyanin Superfamily AT5G25090 55.469 8.59e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3125 - - ahf:112697568 323.168